matthiasdiener
commented
3 years ago I can install vtk on both Python 3.8 and 3.9 for linux-64. Can you try updating your conda environment before installing vtk?
Closed Firestar-Reimu closed 10 months ago
matthiasdiener
commented
3 years ago I can install vtk on both Python 3.8 and 3.9 for linux-64. Can you try updating your conda environment before installing vtk?
Firestar-Reimu
commented
3 years ago The following specifications were found to be incompatible with your system:
- feature:/linux-64::__glibc==2.33=0
- python=3.9 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- vtk -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17']
Your installed version is: 2.33But my conda list is:
_libgcc_mutex 0.1 main
_openmp_mutex 4.5 1_gnu
alabaster 0.7.12 pyhd3eb1b0_0
appdirs 1.4.4 py_0
argh 0.26.2 py39h06a4308_0
argon2-cffi 20.1.0 py39h27cfd23_1
arrow 0.13.1 py39h06a4308_0
astroid 2.6.6 py39h06a4308_0
astropy 4.2.1 py39h27cfd23_1
async_generator 1.10 pyhd3eb1b0_0
atomicwrites 1.4.0 py_0
attrs 21.2.0 pyhd3eb1b0_0
autopep8 1.5.6 pyhd3eb1b0_0
babel 2.9.1 pyhd3eb1b0_0
backcall 0.2.0 pyhd3eb1b0_0
binaryornot 0.4.4 pyhd3eb1b0_1
black 19.10b0 py_0
blas 1.0 mkl
bleach 4.0.0 pyhd3eb1b0_0
brotli 1.0.9 he6710b0_2
brotlipy 0.7.0 py39h27cfd23_1003
ca-certificates 2021.7.5 h06a4308_1
certifi 2021.5.30 py39h06a4308_0
cffi 1.14.6 py39h400218f_0
chardet 4.0.0 py39h06a4308_1003
click 8.0.1 pyhd3eb1b0_0
cloudpickle 1.6.0 py_0
conda 4.10.3 py39h06a4308_0
conda-package-handling 1.7.3 py39h27cfd23_1
cookiecutter 1.7.2 pyhd3eb1b0_0
cryptography 3.4.7 py39hd23ed53_0
cycler 0.10.0 py39h06a4308_0
dbus 1.13.18 hb2f20db_0
decorator 5.0.9 pyhd3eb1b0_0
defusedxml 0.7.1 pyhd3eb1b0_0
diff-match-patch 20200713 py_0
docutils 0.17.1 py39h06a4308_1
entrypoints 0.3 py39h06a4308_0
et_xmlfile 1.1.0 py39h06a4308_0
expat 2.4.1 h2531618_2
flake8 3.9.0 pyhd3eb1b0_0
fontconfig 2.13.1 h6c09931_0
fonttools 4.25.0 pyhd3eb1b0_0
freetype 2.10.4 h5ab3b9f_0
future 0.18.2 py39h06a4308_1
glib 2.69.0 h5202010_0
gst-plugins-base 1.14.0 h8213a91_2
gstreamer 1.14.0 h28cd5cc_2
icu 58.2 he6710b0_3
idna 2.10 pyhd3eb1b0_0
imagesize 1.2.0 pyhd3eb1b0_0
importlib-metadata 3.10.0 py39h06a4308_0
importlib_metadata 3.10.0 hd3eb1b0_0
inflection 0.5.1 py39h06a4308_0
intel-openmp 2021.3.0 h06a4308_3350
intervaltree 3.1.0 py_0
ipykernel 5.3.4 py39hb070fc8_0
ipython 7.22.0 py39hb070fc8_0
ipython_genutils 0.2.0 pyhd3eb1b0_1
ipywidgets 7.6.3 pyhd3eb1b0_1
isort 5.9.2 pyhd3eb1b0_0
jdcal 1.4.1 py_0
jedi 0.17.2 py39h06a4308_1
jeepney 0.7.1 pyhd3eb1b0_0
jinja2 2.11.3 pyhd3eb1b0_0
jinja2-time 0.2.0 pyhd3eb1b0_2
jpeg 9b h024ee3a_2
jsonschema 3.2.0 py_2
jupyter 1.0.0 py39h06a4308_7
jupyter_client 6.1.12 pyhd3eb1b0_0
jupyter_console 6.4.0 pyhd3eb1b0_0
jupyter_core 4.7.1 py39h06a4308_0
jupyterlab_pygments 0.1.2 py_0
jupyterlab_widgets 1.0.0 pyhd3eb1b0_1
keyring 23.0.1 py39h06a4308_0
kiwisolver 1.3.1 py39h2531618_0
lazy-object-proxy 1.6.0 py39h27cfd23_0
lcms2 2.12 h3be6417_0
ld_impl_linux-64 2.35.1 h7274673_9
libffi 3.3 he6710b0_2
libgcc-ng 9.3.0 h5101ec6_17
libgfortran-ng 7.5.0 ha8ba4b0_17
libgfortran4 7.5.0 ha8ba4b0_17
libgomp 9.3.0 h5101ec6_17
libpng 1.6.37 hbc83047_0
libsodium 1.0.18 h7b6447c_0
libspatialindex 1.9.3 h2531618_0
libstdcxx-ng 9.3.0 hd4cf53a_17
libtiff 4.2.0 h85742a9_0
libuuid 1.0.3 h1bed415_2
libwebp-base 1.2.0 h27cfd23_0
libxcb 1.14 h7b6447c_0
libxml2 2.9.12 h03d6c58_0
lz4-c 1.9.3 h295c915_1
markupsafe 1.1.1 py39h27cfd23_0
matplotlib 3.4.2 py39h06a4308_0
matplotlib-base 3.4.2 py39hab158f2_0
mccabe 0.6.1 py39h06a4308_1
mistune 0.8.4 py39h27cfd23_1000
mkl 2021.3.0 h06a4308_520
mkl-service 2.4.0 py39h7f8727e_0
mkl_fft 1.3.0 py39h42c9631_2
mkl_random 1.2.2 py39h51133e4_0
munkres 1.1.4 py_0
mypy_extensions 0.4.3 py39h06a4308_0
nbclient 0.5.3 pyhd3eb1b0_0
nbconvert 6.1.0 py39h06a4308_0
nbformat 5.1.3 pyhd3eb1b0_0
ncurses 6.2 he6710b0_1
nest-asyncio 1.5.1 pyhd3eb1b0_0
notebook 6.4.0 py39h06a4308_0
numpy 1.20.3 py39hf144106_0
numpy-base 1.20.3 py39h74d4b33_0
numpydoc 1.1.0 pyhd3eb1b0_1
olefile 0.46 py_0
openjpeg 2.3.0 h05c96fa_1
openpyxl 3.0.7 pyhd3eb1b0_0
openssl 1.1.1k h27cfd23_0
packaging 21.0 pyhd3eb1b0_0
pandocfilters 1.4.3 py39h06a4308_1
parso 0.7.0 py_0
pathspec 0.7.0 py_0
pcre 8.45 h295c915_0
pexpect 4.8.0 pyhd3eb1b0_3
pickleshare 0.7.5 pyhd3eb1b0_1003
pillow 8.3.1 py39h2c7a002_0
pip 21.2.2 py39h06a4308_0
pluggy 0.13.1 py39h06a4308_0
poyo 0.5.0 pyhd3eb1b0_0
prometheus_client 0.11.0 pyhd3eb1b0_0
prompt-toolkit 3.0.17 pyh06a4308_0
prompt_toolkit 3.0.17 hd3eb1b0_0
psutil 5.8.0 py39h27cfd23_1
ptyprocess 0.7.0 pyhd3eb1b0_2
pycodestyle 2.6.0 pyhd3eb1b0_0
pycosat 0.6.3 py39h27cfd23_0
pycparser 2.20 py_2
pydocstyle 6.1.1 pyhd3eb1b0_0
pyerfa 2.0.0 py39h27cfd23_0
pyflakes 2.2.0 pyhd3eb1b0_0
pygments 2.9.0 pyhd3eb1b0_0
pylint 2.9.6 py39h06a4308_1
pyls-black 0.4.6 hd3eb1b0_0
pyls-spyder 0.3.2 pyhd3eb1b0_0
pyopenssl 20.0.1 pyhd3eb1b0_1
pyparsing 2.4.7 pyhd3eb1b0_0
pyqt 5.9.2 py39h2531618_6
pyrsistent 0.18.0 py39h7f8727e_0
pysocks 1.7.1 py39h06a4308_0
python 3.9.6 h12debd9_0
python-dateutil 2.8.2 pyhd3eb1b0_0
python-jsonrpc-server 0.4.0 py_0
python-language-server 0.36.2 pyhd3eb1b0_0
python-slugify 5.0.2 pyhd3eb1b0_0
pytz 2021.1 pyhd3eb1b0_0
pyxdg 0.27 pyhd3eb1b0_0
pyyaml 5.4.1 py39h27cfd23_1
pyzmq 20.0.0 py39h2531618_1
qdarkstyle 3.0.2 pyhd3eb1b0_0
qstylizer 0.1.10 pyhd3eb1b0_0
qt 5.9.7 h5867ecd_1
qtawesome 1.0.2 pyhd3eb1b0_0
qtconsole 5.1.0 pyhd3eb1b0_0
qtpy 1.9.0 py_0
readline 8.1 h27cfd23_0
regex 2021.8.3 py39h7f8727e_0
requests 2.25.1 pyhd3eb1b0_0
rope 0.19.0 pyhd3eb1b0_0
rtree 0.9.7 py39h06a4308_1
ruamel_yaml 0.15.100 py39h27cfd23_0
scipy 1.6.2 py39had2a1c9_1
secretstorage 3.3.1 py39h06a4308_0
send2trash 1.5.0 pyhd3eb1b0_1
setuptools 52.0.0 py39h06a4308_0
sip 4.19.13 py39h2531618_0
six 1.16.0 pyhd3eb1b0_0
snowballstemmer 2.1.0 pyhd3eb1b0_0
sortedcontainers 2.4.0 pyhd3eb1b0_0
sphinx 4.0.2 pyhd3eb1b0_0
sphinxcontrib-applehelp 1.0.2 pyhd3eb1b0_0
sphinxcontrib-devhelp 1.0.2 pyhd3eb1b0_0
sphinxcontrib-htmlhelp 2.0.0 pyhd3eb1b0_0
sphinxcontrib-jsmath 1.0.1 pyhd3eb1b0_0
sphinxcontrib-qthelp 1.0.3 pyhd3eb1b0_0
sphinxcontrib-serializinghtml 1.1.5 pyhd3eb1b0_0
spyder 5.0.5 py39h06a4308_2
spyder-kernels 2.0.5 py39h06a4308_0
sqlite 3.36.0 hc218d9a_0
terminado 0.9.4 py39h06a4308_0
testpath 0.5.0 pyhd3eb1b0_0
text-unidecode 1.3 py_0
textdistance 4.2.1 pyhd3eb1b0_0
three-merge 0.1.1 pyhd3eb1b0_0
tinycss 0.4 pyhd3eb1b0_1002
tk 8.6.10 hbc83047_0
toml 0.10.2 pyhd3eb1b0_0
tornado 6.1 py39h27cfd23_0
tqdm 4.62.0 pyhd3eb1b0_1
traitlets 5.0.5 pyhd3eb1b0_0
typed-ast 1.4.3 py39h7f8727e_1
typing_extensions 3.10.0.0 pyh06a4308_0
tzdata 2021a h52ac0ba_0
ujson 4.0.2 py39h2531618_0
unidecode 1.2.0 pyhd3eb1b0_0
urllib3 1.26.6 pyhd3eb1b0_1
watchdog 2.1.3 py39h06a4308_0
wcwidth 0.2.5 py_0
webencodings 0.5.1 py39h06a4308_1
wheel 0.36.2 pyhd3eb1b0_0
whichcraft 0.6.1 pyhd3eb1b0_0
widgetsnbextension 3.5.1 py39h06a4308_0
wrapt 1.12.1 py39he8ac12f_1
wurlitzer 2.1.1 py39h06a4308_0
xz 5.2.5 h7b6447c_0
yaml 0.2.5 h7b6447c_0
yapf 0.31.0 pyhd3eb1b0_0
zeromq 4.3.4 h2531618_0
zipp 3.5.0 pyhd3eb1b0_0
zlib 1.2.11 h7b6447c_3
zstd 1.4.9 haebb681_0Have you tried running conda update --all? Some of these packages seem a bit out of date. Apart from this, I can't really think of a reason why it would not work for you. Another thing you could try is to install vtk in a fresh conda environment.
Firestar-Reimu
commented
3 years ago Yes I have run conda update --all before running conda list, I will try it later. Maybe it is because I install spyder and jupyter before.
Firestar-Reimu
commented
3 years ago Have you tried running
conda update --all? Some of these packages seem a bit out of date. Apart from this, I can't really think of a reason why it would not work for you. Another thing you could try is to installvtkin a fresh conda environment.
I have tried a fresh install but failed. Is your python 3.9 or 3.8? It seems that vtk is only compatible with 2.7~3.7. But I can install successfully on windows which is also 3.9.
UnsatisfiableError: The following specifications were found
to be incompatible with the existing python installation in your environment:
Specifications:
- vtk -> python[version='>=2.7,<2.8.0a0|>=3.7,<3.8.0a0|>=3.6,<3.7.0a0|>=3.5,<3.6.0a0']
Your python: python=3.9
If python is on the left-most side of the chain, that's the version you've asked for.
When python appears to the right, that indicates that the thing on the left is somehow
not available for the python version you are constrained to. Note that conda will not
change your python version to a different minor version unless you explicitly specify
that.
The following specifications were found to be incompatible with your system:
- feature:/linux-64::__glibc==2.33=0
- python=3.9 -> libgcc-ng[version='>=7.5.0'] -> __glibc[version='>=2.17']
- vtk -> libgcc-ng[version='>=7.3.0'] -> __glibc[version='>=2.17']
Your installed version is: 2.33
Tobias-Fischer
commented
10 months ago Discussion about very old versions, closing
When I run
conda install vtk, it says:It seems that vtk on conda does not support python 3.8 and 3.9