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A system-level, binary package and environment manager running on all major operating systems and platforms.
https://docs.conda.io/projects/conda/
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`conda update -n base conda` doesn't update #6941

Closed nick-youngblut closed 1 month ago

nick-youngblut commented 6 years ago

Sorry if this has already reported, but I couldn't find any issues directly stating this:

$ conda update -n base conda
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.4.6
  latest version: 4.4.10

Please update conda by running

    $ conda update -n base conda

# All requested packages already installed.

As the output shows, conda states that I should update to 4.4.10, but the instructions for updating conda (conda update -n base conda) don't work.

I'm running conda on Ubuntu 16.04.3

kalefranz commented 6 years ago

Well that’s a new one. Maybe... How about 

conda install conda=4.4.10
nick-youngblut commented 6 years ago

Yeah, that seems to work:

$ conda install conda=4.4.10
Solving environment: done

## Package Plan ##

  environment location: /ebio/abt3_projects/software/dev/miniconda3_dev

  added / updated specs:
    - conda=4.4.10

The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    conda-4.4.10               |           py36_0         929 KB

The following packages will be UPDATED:

    conda: 4.4.6-py36_0 anaconda --> 4.4.10-py36_0
kalefranz commented 6 years ago

I'm going to keep this open for now. We had some similar issues that we resolved in 4.4.11, but that problem shouldn't have triggered this one. I don't understand what you were bumping into there.

moi90 commented 6 years ago

My conda installation actually wants to downgrade itself on upgrade:

$ conda update -n base conda
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.4.10
  latest version: 4.4.11

Please update conda by running

    $ conda update -n base conda

## Package Plan ##

  environment location: /data1/mschroeder/miniconda3

  added / updated specs: 
    - conda

The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    certifi-2018.1.18          |           py36_0         143 KB  conda-forge
    conda-4.3.34               |           py36_0         514 KB  conda-forge
    ------------------------------------------------------------
                                           Total:         657 KB

The following packages will be UPDATED:

    ca-certificates: 2017.08.26-h1d4fec5_0 --> 2018.1.18-0      conda-forge
    certifi:         2018.1.18-py36_0      --> 2018.1.18-py36_0 conda-forge
    openssl:         1.0.2n-hb7f436b_0     --> 1.0.2n-0         conda-forge

The following packages will be DOWNGRADED:

    conda:           4.4.10-py36_0         --> 4.3.34-py36_0    conda-forge

If I do conda install -n base conda=4.4.11, won't this pin the version of conda to this specific value?

kalefranz commented 6 years ago

You’re pulling conda from conda-forge because of channel priority. What you want is

conda install -n base defaults::conda

or edit your ~/.condarc file to place defaults above conda-forge

channels:
  - defaults
  - conda-forge
moi90 commented 6 years ago

You are right, @kalefranz! Any idea, why the channel priority was reversed?

camillescott commented 6 years ago

I just ran into the same problem; for me it was because bioconda has you reverse the priority in their installation instructions: https://bioconda.github.io/#set-up-channels. Perhaps @moi90 and @nick-youngblut have been using it?

amodig commented 6 years ago

I also encountered this:

➜ conda update -n base conda
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.5.0
  latest version: 4.5.1

Please update conda by running

    $ conda update -n base conda

# All requested packages already installed.

Here's conda info:

➜ conda info                 

     active environment : None
            shell level : 0
       user config file : /home/amodig/.condarc
 populated config files : /home/amodig/.condarc
          conda version : 4.5.0
    conda-build version : 3.8.0
         python version : 3.6.5.final.0
       base environment : /home/amodig/anaconda3  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/free/linux-64
                          https://repo.anaconda.com/pkgs/free/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://repo.anaconda.com/pkgs/pro/linux-64
                          https://repo.anaconda.com/pkgs/pro/noarch
                          https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
          package cache : /home/amodig/anaconda3/pkgs
                          /home/amodig/.conda/pkgs
       envs directories : /home/amodig/anaconda3/envs
                          /home/amodig/.conda/envs
               platform : linux-64
             user-agent : conda/4.5.0 requests/2.18.4 CPython/3.6.5 Linux/4.13.0-38-generic ubuntu/17.10 glibc/2.26
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False
esvhd commented 6 years ago

I'm seeing the same issue on Windows 10. Output and info below. Any suggestions appreciated.

(base) D:\>conda update -n base conda
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.5.2
  latest version: 4.5.3

Please update conda by running

    $ conda update -n base conda

# All requested packages already installed.

(base) D:\>conda info

     active environment : base
    active env location : C:\Anaconda3
            shell level : 1
       user config file : C:\Users\x\.condarc
 populated config files : C:\Users\x\.condarc
          conda version : 4.5.2
    conda-build version : 3.4.1
         python version : 3.6.5.final.0
       base environment : C:\Anaconda3  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/win-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/free/win-64
                          https://repo.anaconda.com/pkgs/free/noarch
                          https://repo.anaconda.com/pkgs/r/win-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://repo.anaconda.com/pkgs/pro/win-64
                          https://repo.anaconda.com/pkgs/pro/noarch
                          https://repo.anaconda.com/pkgs/msys2/win-64
                          https://repo.anaconda.com/pkgs/msys2/noarch
                          https://conda.anaconda.org/conda-forge/win-64
                          https://conda.anaconda.org/conda-forge/noarch
          package cache : C:\Anaconda3\pkgs
                          C:\Users\x\AppData\Local\conda\conda\pkgs
       envs directories : C:\Anaconda3\envs
                          C:\Users\x\AppData\Local\conda\conda\envs
                          C:\Users\x\.conda\envs
               platform : win-64
             user-agent : conda/4.5.2 requests/2.18.4 CPython/3.6.5 Windows/10 Windows/10.0.16299
          administrator : False
             netrc file : None
           offline mode : False
dbl001 commented 6 years ago

Any ideas?

$ conda update conda
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.5.3
  latest version: 4.5.4

Please update conda by running

    $ conda update -n base conda

# All requested packages already installed.

David-Laxers-MacBook-Pro:scraper davidlaxer$ conda install -n base defaults::conda
Solving environment: done

## Package Plan ##

  environment location: /Users/davidlaxer/anaconda

  added / updated specs: 
    - defaults::conda

The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    setuptools-39.2.0          |           py27_0         582 KB  conda-forge
    scandir-1.7                |           py27_0          28 KB  conda-forge
    glob2-0.5                  |           py27_0          13 KB  conda-forge
    conda-build-3.10.5         |           py27_0         427 KB  conda-forge
    pkginfo-1.4.2              |           py27_0          37 KB  conda-forge
    conda-4.5.4                |           py27_0         1.0 MB
    conda-verify-2.0.0         |           py27_0          19 KB  conda-forge
    ------------------------------------------------------------
                                           Total:         2.1 MB

The following NEW packages will be INSTALLED:

    conda-verify: 2.0.0-py27_0  conda-forge
    glob2:        0.5-py27_0    conda-forge
    pkginfo:      1.4.2-py27_0  conda-forge
    scandir:      1.7-py27_0    conda-forge

The following packages will be UPDATED:

    conda:        4.5.3-py27_0  conda-forge --> 4.5.4-py27_0             
    conda-build:  1.21.3-py27_0             --> 3.10.5-py27_0 conda-forge
    setuptools:   27.2.0-py27_0             --> 39.2.0-py27_0 conda-forge

Proceed ([y]/n)? y

Downloading and Extracting Packages
setuptools 39.2.0####################################################### | 100% 
scandir 1.7############################################################# | 100% 
glob2 0.5############################################################### | 100% 
conda-build 3.10.5###################################################### | 100% 
pkginfo 1.4.2########################################################### | 100% 
conda 4.5.4############################################################# | 100% 
conda-verify 2.0.0###################################################### | 100% 
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
David-Laxers-MacBook-Pro:scraper davidlaxer$ conda update anaconda
Solving environment: done

## Package Plan ##

  environment location: /Users/davidlaxer/anaconda

  added / updated specs: 
    - anaconda

The following packages will be DOWNGRADED:

    conda: 4.5.4-py27_0 --> 4.5.3-py27_0 conda-forge

Proceed ([y]/n)?
sarajcev commented 6 years ago

I have the same issue with conda update conda which gives:

Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.5.4
  latest version: 4.5.5

Please update conda by running

    $ conda update -n base conda

# All requested packages already installed.

After issuing conda update -n base conda nothing happens (it reports the same message as above). My channel priority is in order (defaults first). Why is this happening? Thanks!

dbl001 commented 6 years ago

Does this solve the problem(s):

$ conda update -q conda --clobber

On Jul 4, 2018, at 1:19 AM, sarajcev notifications@github.com wrote:

I have the same issue with conda update conda which gives:

Solving environment: done

==> WARNING: A newer version of conda exists. <== current version: 4.5.4 latest version: 4.5.5

Please update conda by running

$ conda update -n base conda

All requested packages already installed.

After issuing conda update -n base conda nothing happens (it reports the same message as above). My channel priority is in order (defaults first). Why is this happening? Thanks!

— You are receiving this because you commented. Reply to this email directly, view it on GitHub https://github.com/conda/conda/issues/6941#issuecomment-402402331, or mute the thread https://github.com/notifications/unsubscribe-auth/AC9i2yx1cd-vYmDb1y8Cnpr6d-8DiIDQks5uDHqrgaJpZM4SSMrd.

sarajcev commented 6 years ago

Thanks @dbl001 for the reply. However, before I try this solution, I was wondering if this --clobber switch could potentially break my anaconda installation?

michaelaye commented 6 years ago

The other thing one can do to always pull conda from the defaults channel, while otherwise using conda-forge is to pin it only for the base env:

conda activate base
conda config --env --add pinned_packages defaults::conda

The under-advertised --env option enables you to have environment-dependent configurations of your channel priorities. You can check what effect this command had by executing:

conda config --show-sources
Accelerator086 commented 6 years ago

I had the same problem as yours that I cannot update by entering conda update --all in anaconda prompt. However, the problem is that the channel defaults does not work, which means that defaults is a bad channel. I then removed the channel default and add channel anaconda, then repeatly entered conda update --all, it really works. conda config --add channels anaconda conda config --remove channels defaults Seems that you need to adjust something in anaconda prompt. And do notice that pinned_channels is empty.

scw commented 6 years ago

A pretty simple case to hit this issue is to have inadvertently added a conda pin in the conda-meta\pinned file. If you have this, conda upgrade -n base conda will have no effect, but also not emit information about why the upgrade couldn't proceed (at least trying this on a conda 4.4 instance). Some folks pin conda versions as in this post which can lead to this behavior. https://github.com/conda/conda/issues/6399 has a request to provide more information about pinned package status, but not specifically for update.

recol3 commented 5 years ago

I'm experiencing this issue trying to update from 4.5.11 to 4.6.4, but my channels are the defaults and I don't think I have anything pinned.

When I try conda update -n base -c defaults conda, I get the following:

Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.5.11
  latest version: 4.6.4

Please update conda by running

    $ conda update -n base -c defaults conda

# All requested packages already installed.

The output of conda info is:

     active environment : None
       user config file : /home/robert/.condarc
 populated config files :
          conda version : 4.5.11
    conda-build version : 2.0.2
         python version : 3.5.2.final.0
       base environment : /home/robert/anaconda3  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/free/linux-64
                          https://repo.anaconda.com/pkgs/free/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://repo.anaconda.com/pkgs/pro/linux-64
                          https://repo.anaconda.com/pkgs/pro/noarch
          package cache : /home/robert/anaconda3/pkgs
                          /home/robert/.conda/pkgs
       envs directories : /home/robert/anaconda3/envs
                          /home/robert/.conda/envs
               platform : linux-64
             user-agent : conda/4.5.11 requests/2.14.2 CPython/3.5.2 Linux/4.4.0-62-generic ubuntu/16.04 glibc/2.23
                UID:GID : 1003:1004
             netrc file : None
           offline mode : False

Any ideas?

ingenika commented 5 years ago

I think the same issue as https://github.com/conda/conda/issues/6591 so the problem as be solved by: conda update -n base conda -c anaconda

recol3 commented 5 years ago

I don't think so -- the problem there was caused by the user having pinned conda, which I haven't, as far as I know. (Actually, I'm not sure what the difference between #6591 and this one is exactly, but neither seems to have a working solution for me.)

But I tried both conda update -n base conda -c defaults and conda update -n base conda -c anaconda anyway and neither worked. The first just produced the same "All requested packages already installed" message; the second downloaded a few packages including conda but all had exactly the same versions as the ones currently installed.

However, I noticed that the output of conda config --show-sources for me is empty. Could that be a problem?

ingenika commented 5 years ago

I've changed the ~/.condarc file, and added conda channels, after that, no message that newer version available

DoleoR commented 5 years ago

I have the same issue. 

 conda update -n base -c defaults conda
 Solving environment: done

 ==> WARNING: A newer version of conda exists. <==
 current version: 4.5.11
 latest version: 4.6.7

Please update conda by running

$ conda update -n base -c defaults conda
All requested packages already installed.

conda config --show-sources

    ==> C:\Users\ZZ\.condarc <==
  channels:
   - defaults
  ssl_verify: True

conda info

  active environment : base
  active env location : C:\Users\ZZ\Anaconda3
          shell level : 1
     user config file : C:\Users\ZZ\.condarc
   populated config files : C:\Users\ZZ\.condarc
        conda version : 4.5.11
   conda-build version : 2.0.2
        python version : 3.5.6.final.0
        base environment : C:\Users\ZZ\Anaconda3  (writable)
         channel URLs : https://repo.anaconda.com/pkgs/main/win-64
                      https://repo.anaconda.com/pkgs/main/noarch
                      https://repo.anaconda.com/pkgs/free/win-64
                      https://repo.anaconda.com/pkgs/free/noarch
                      https://repo.anaconda.com/pkgs/r/win-64
                      https://repo.anaconda.com/pkgs/r/noarch
                      https://repo.anaconda.com/pkgs/pro/win-64
                      https://repo.anaconda.com/pkgs/pro/noarch
                      https://repo.anaconda.com/pkgs/msys2/win-64
                      https://repo.anaconda.com/pkgs/msys2/noarch
       package cache : C:\Users\ZZ\Anaconda3\pkgs
                      C:\Users\ZZ\AppData\Local\conda\conda\pkgs
     envs directories : C:\Users\ZZ\Anaconda3\envs
                        C:\Users\ZZ\AppData\Local\conda\conda\envs
                        C:\Users\ZZ\.conda\envs
             platform : win-64
           user-agent : conda/4.5.11 requests/2.18.4 CPython/3.5.6 Windows/10 Windows/10.0.17763
        administrator : True
           netrc file : None
         offline mode : False
kienerj commented 5 years ago

Same problem for me and it affects Ubuntu and Windows. conda version is 4.5.11 in both cases.

On Ubuntu I can run conda update python and then it actually updates conda but this makes the env inconsistent and unusable. On windows this command gives same warning as updating conda.

EDIT:

Given the time I wasted with no success it was just way faster to remove everything (anaconda and envrionments) and install from scratch. Best to export yml files for all envs and then use that to recreate them quickly.

ptrebert commented 4 years ago

If this is still active, then same here:

$ conda update -n base -c defaults conda
Collecting package metadata (current_repodata.json): failed

# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<

    Traceback (most recent call last):
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/exceptions.py", line 1062, in __call__
        return func(*args, **kwargs)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/cli/main.py", line 84, in _main
        exit_code = do_call(args, p)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/cli/conda_argparse.py", line 82, in do_call
        exit_code = getattr(module, func_name)(args, parser)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/cli/main_update.py", line 20, in execute
        install(args, parser, 'update')
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/cli/install.py", line 256, in install
        force_reinstall=context.force_reinstall or context.force,
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/core/solve.py", line 112, in solve_for_transaction
        force_remove, force_reinstall)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/core/solve.py", line 150, in solve_for_diff
        force_remove)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/core/solve.py", line 249, in solve_final_state
        ssc = self._collect_all_metadata(ssc)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/common/io.py", line 88, in decorated
        return f(*args, **kwds)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/core/solve.py", line 389, in _collect_all_metadata
        index, r = self._prepare(prepared_specs)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/core/solve.py", line 974, in _prepare
        self.subdirs, prepared_specs, self._repodata_fn)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/core/index.py", line 216, in get_reduced_index
        push_record(record)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/core/index.py", line 190, in push_record
        combined_depends = record.combined_depends
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/models/records.py", line 326, in combined_depends
        MatchSpec(spec, optional=True) for spec in self.constrains or ()
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/models/match_spec.py", line 467, in merge
        reduce(lambda x, y: x._merge(y, union), group) if len(group) > 1 else group[0]
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/models/match_spec.py", line 467, in <lambda>
        reduce(lambda x, y: x._merge(y, union), group) if len(group) > 1 else group[0]
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/models/match_spec.py", line 498, in _merge
        final = this_component.merge(that_component)
      File "/scratch/bioinf/users/pebert/software/conda/lib/python3.7/site-packages/conda/models/match_spec.py", line 751, in merge
        % (self.raw_value, other.raw_value))
    ValueError: Incompatible component merge:
      - 'cp38'
      - '*_cp38'

`$ /scratch/bioinf/users/pebert/software/conda/bin/conda update -n base -c defaults conda`

  environment variables:
                 CIO_TEST=<not set>
        CONDA_DEFAULT_ENV=base
                CONDA_EXE=/scratch/bioinf/users/pebert/software/conda/bin/conda
             CONDA_PREFIX=/scratch/bioinf/users/pebert/software/conda
    CONDA_PROMPT_MODIFIER=(base)
         CONDA_PYTHON_EXE=/scratch/bioinf/users/pebert/software/conda/bin/python
               CONDA_ROOT=/scratch/bioinf/users/pebert/software/conda
              CONDA_SHLVL=1
             DOTFILESPATH=/mpietc/dotfiles
                     PATH=/scratch/bioinf/users/pebert/software/conda/bin:/scratch/bioinf/users/
                          pebert/software/conda/bin:/scratch/bioinf/users/pebert/software/conda/
                          condabin:/scratch/bioinf/users/pebert/software/conda/bin:/scratch/bioi
                          nf/users/pebert/software/conda/condabin:/bin:/usr/bin
       REQUESTS_CA_BUNDLE=<not set>
            SSL_CERT_FILE=<not set>

     active environment : base
    active env location : /scratch/bioinf/users/pebert/software/conda
            shell level : 1
       user config file : /home/pebert/.condarc
 populated config files : /home/pebert/.condarc
          conda version : 4.7.10
    conda-build version : not installed
         python version : 3.7.3.final.0
       virtual packages : 
       base environment : /scratch/bioinf/users/pebert/software/conda  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://conda.anaconda.org/bioconda/linux-64
                          https://conda.anaconda.org/bioconda/noarch
                          https://conda.anaconda.org/r/linux-64
                          https://conda.anaconda.org/r/noarch
          package cache : /scratch/bioinf/users/pebert/software/conda/pkgs
                          /home/pebert/.conda/pkgs
       envs directories : /scratch/bioinf/users/pebert/software/conda/envs
                          /home/pebert/.conda/envs
               platform : linux-64
             user-agent : conda/4.7.10 requests/2.22.0 CPython/3.7.3 Linux/4.19.75.1.amd64-smp debian/10 glibc/2.28
                UID:GID : 20751:30029
             netrc file : None
           offline mode : False
sfpacman commented 4 years ago

I have the same issue with linux CentOS. updated version of conda is downloaded but doesn't seems to be installed.

The following packages will be UPDATED:
  ca-certificates     pkgs/main::ca-certificates-2020.1.1-0 --> conda-forge::ca-certificates-2020.4.5.1-hecc5488_0
  certifi                                 2019.11.28-py37_0 --> 2020.4.5.1-py37_0
  conda                                        4.8.2-py37_0 --> 4.8.3-py37_0
  conda-package-han~                   1.6.0-py37h7b6447c_0 --> 1.6.1-py37h7b6447c_0
  cryptography                           2.8-py37h1ba5d50_0 --> 2.9.2-py37h1ba5d50_0
  idna                  pkgs/main/linux-64::idna-2.8-py37_0 --> pkgs/main/noarch::idna-2.9-py_1
  ld_impl_linux-64   pkgs/main::ld_impl_linux-64-2.33.1-h5~ --> conda-forge::ld_impl_linux-64-2.34-h53a641e_4
  libgcc-ng           pkgs/main::libgcc-ng-9.1.0-hdf63c60_0 --> conda-forge::libgcc-ng-9.2.0-hdf63c60_0
  libstdcxx-ng       pkgs/main::libstdcxx-ng-9.1.0-hdf63c6~ --> conda-forge::libstdcxx-ng-9.2.0-hdf63c60_2
  ncurses                                    6.2-he6710b0_0 --> 6.2-he6710b0_1
  openssl                                 1.1.1d-h7b6447c_4 --> 1.1.1g-h7b6447c_0
  pip                 pkgs/main/linux-64::pip-20.0.2-py37_1 --> conda-forge/noarch::pip-20.1.1-py_1
  pycparser          pkgs/main/linux-64::pycparser-2.19-py~ --> pkgs/main/noarch::pycparser-2.20-py_0
  requests                                    2.22.0-py37_1 --> 2.23.0-py37_0
  setuptools            pkgs/main::setuptools-45.2.0-py37_0 --> conda-forge::setuptools-47.1.0-py37hc8dfbb8_0
  six                 pkgs/main/linux-64::six-1.14.0-py37_0 --> conda-forge/noarch::six-1.15.0-pyh9f0ad1d_0
  sqlite                                  3.31.1-h7b6447c_0 --> 3.31.1-h62c20be_1
  tk                         pkgs/main::tk-8.6.8-hbc83047_0 --> conda-forge::tk-8.6.10-hed695b0_0
  tqdm                                          4.42.1-py_0 --> 4.46.0-py_0
  urllib3            pkgs/main/linux-64::urllib3-1.25.8-py~ --> conda-forge/noarch::urllib3-1.25.9-py_0
  xz                                       5.2.4-h14c3975_4 --> 5.2.5-h7b6447c_0
  yaml                     pkgs/main::yaml-0.1.7-had09818_2 --> conda-forge::yaml-0.2.4-h516909a_0

The following packages will be SUPERSEDED by a higher-priority channel:

  ruamel_yaml        pkgs/main::ruamel_yaml-0.15.87-py37h7~ --> conda-forge::ruamel_yaml-0.15.80-py37h8f50634_1001

After running update:

    active env location : /SOMEPATH/anaconda
            shell level : 1
       user config file : /SOMEPATH/.condarc
 populated config files : /SOMEPATH/.condarc
          conda version : 4.7.5
    conda-build version : 3.17.8
         python version : 3.7.6.final.0
       virtual packages : 
       base environment : /SOMEPATH/anaconda  (writable)
           channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
                          https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://conda.anaconda.org/bioconda/linux-64
                          https://conda.anaconda.org/bioconda/noarch
          package cache : /SOMEPATH/anaconda/pkgs
                          /home/SOMEPATH/.conda/pkgs
       envs directories : /SOMEPATH/anaconda/envs
                          /home/SOMEPATH/.conda/envs
               platform : linux-64
             user-agent : conda/4.7.5 requests/2.21.0 CPython/3.7.6 Linux/2.6.32-696.18.7.el6.centos.plus.x86_64 centos/6.9 glibc/2.12
                UID:GID : 505:505
             netrc file : None
           offline mode : False
loikein commented 3 years ago

Any news on this issue?

Same problem here when trying to update from 4.8.4. I do automated regular upgrades on all the environments and packages on my computer, and thus did not even notice that it was not updating for a long while…

conda update -n base conda ```text conda update -n base conda --yes Collecting package metadata (current_repodata.json): done Solving environment: / ==> WARNING: A newer version of conda exists. <== current version: 4.8.4 latest version: 4.10.1 Please update conda by running $ conda update -n base conda # All requested packages already installed. ``` ???
mikkelmedm commented 3 years ago

Also having this issue on linux. Really curious about a fix

mbp28 commented 2 years ago

I encountered this issue, too, when I tried to update conda from 4.10.3 to 4.11 I believe it is caused by an incompatibility of newer conda versions with older Python versions. In particular, I tried to update conda in the base environment as the prompt requested. My base environment had Python=3.6 and my current conda version was 4.10.3

  1. I tried the command in the prompt: conda update -n base -c defaults conda. This did nothing.
  2. In the base env, I forcedconda install conda=4.11.0. This threw an error about a Python incompatibility: 
    
UnsatisfiableError: The following specifications were found
to be incompatible with the existing python installation in your environment:

Specifications:

Your python: python=3.6

If python is on the left-most side of the chain, that's the version you've asked for. When python appears to the right, that indicates that the thing on the left is somehow not available for the python version you are constrained to. Note that conda will not change your python version to a different minor version unless you explicitly specify that.


3. I upgraded the Python in the base environment to 3.8 with `conda install python=3.8` and then updated conda. This worked.
mzannoni commented 2 years ago

I encountered this while upgrading from 4.12.0 to 4.13.0.

This is what I always got, every time I run conda update -n base conda:

❯ conda update -n base conda
Collecting package metadata (current_repodata.json): done
Solving environment: \ 
The environment is inconsistent, please check the package plan carefully
The following packages are causing the inconsistency:

  - defaults/linux-64::anaconda==custom=py38_1
  - conda-forge/linux-64::scikit-image==0.19.2=py38h43a58ef_0
  - conda-forge/noarch::jupyter_client==7.3.1=pyhd8ed1ab_0
  - conda-forge/noarch::intervaltree==3.0.2=py_0
  - conda-forge/noarch::html5lib==1.1=pyh9f0ad1d_0
  - conda-forge/noarch::backcall==0.2.0=pyh9f0ad1d_0
  - defaults/linux-64::_ipyw_jlab_nb_ext_conf==0.1.0=py38_0
  - conda-forge/linux-64::fonttools==4.33.3=py38h0a891b7_0
  - conda-forge/linux-64::gevent==21.12.0=py38h0a891b7_1
  - conda-forge/noarch::isort==5.10.1=pyhd8ed1ab_0
  - conda-forge/linux-64::brotlipy==0.7.0=py38h0a891b7_1004
  - conda-forge/noarch::backports==1.0=py_2
  - conda-forge/noarch::jupyter_console==6.4.3=pyhd8ed1ab_0
  - conda-forge/noarch::mccabe==0.6.1=py_1
  - conda-forge/noarch::nbclassic==0.3.7=pyhd8ed1ab_0
  - conda-forge/linux-64::llvmlite==0.38.1=py38h38d86a4_0
  - conda-forge/noarch::cycler==0.11.0=pyhd8ed1ab_0
  - conda-forge/noarch::flake8==4.0.1=pyhd8ed1ab_2
  - conda-forge/noarch::sphinx==5.0.0=pyh6c4a22f_1
  - conda-forge/noarch::ipywidgets==7.7.0=pyhd8ed1ab_0
  - conda-forge/noarch::requests==2.27.1=pyhd8ed1ab_0
  - conda-forge/noarch::pylint==2.13.9=pyhd8ed1ab_1
  - conda-forge/linux-64::ujson==5.3.0=py38hfa26641_0
  - conda-forge/noarch::appdirs==1.4.4=pyh9f0ad1d_0
  - conda-forge/noarch::traitlets==5.2.1.post0=pyhd8ed1ab_0
  - defaults/linux-64::daal4py==2021.5.0=py38h78b71dc_0
  - conda-forge/linux-64::msgpack-python==1.0.3=py38h43d8883_1
  - conda-forge/noarch::glob2==0.7=py_0
  - conda-forge/noarch::yapf==0.32.0=pyhd8ed1ab_0
  - conda-forge/noarch::autopep8==1.6.0=pyhd8ed1ab_1
  - conda-forge/linux-64::pandas==1.4.2=py38h47df419_2
  - conda-forge/noarch::three-merge==0.1.1=pyh9f0ad1d_0
  - conda-forge/noarch::joblib==1.1.0=pyhd8ed1ab_0
  - conda-forge/linux-64::pyqtwebengine==5.12.1=py38h7400c14_8
  - conda-forge/noarch::decorator==5.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::pandocfilters==1.5.0=pyhd8ed1ab_0
  - conda-forge/linux-64::cffi==1.15.0=py38h3931269_0
  - conda-forge/noarch::pep8==1.7.1=py_0
  - conda-forge/noarch::qtawesome==1.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::wurlitzer==3.0.2=pyhd8ed1ab_2
  - conda-forge/noarch::pyparsing==3.0.9=pyhd8ed1ab_0
  - conda-forge/noarch::tinycss==0.4=pyhd8ed1ab_1002
  - conda-forge/noarch::boto==2.49.0=py_0
  - conda-forge/noarch::python-dateutil==2.8.2=pyhd8ed1ab_0
  - conda-forge/noarch::py==1.11.0=pyh6c4a22f_0
  - conda-forge/noarch::flit-core==3.7.1=pyhd8ed1ab_0
  - conda-forge/linux-64::pyerfa==2.0.0.1=py38h71d37f0_2
  - conda-forge/noarch::jupyterlab_widgets==1.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::python-lsp-jsonrpc==1.0.0=pyhd8ed1ab_0
  - conda-forge/noarch::pycparser==2.21=pyhd8ed1ab_0
  - conda-forge/noarch::zict==2.2.0=pyhd8ed1ab_0
  - conda-forge/noarch::qstylizer==0.2.1=pyhd8ed1ab_0
  - conda-forge/noarch::arrow==1.2.2=pyhd8ed1ab_0
  - conda-forge/linux-64::path==16.4.0=py38h578d9bd_1
  - conda-forge/linux-64::pyrsistent==0.18.1=py38h0a891b7_1
  - conda-forge/noarch::tomli==2.0.1=pyhd8ed1ab_0
  - conda-forge/noarch::simplegeneric==0.8.1=py_1
  - conda-forge/noarch::jsonschema==4.5.1=pyhd8ed1ab_0
  - conda-forge/noarch::pexpect==4.8.0=pyh9f0ad1d_2
  - conda-forge/linux-64::gmpy2==2.1.2=py38h8384b0a_0
  - conda-forge/noarch::multipledispatch==0.6.0=py_0
  - conda-forge/noarch::openpyxl==3.0.9=pyhd8ed1ab_0
  - conda-forge/noarch::atomicwrites==1.4.0=pyh9f0ad1d_0
  - conda-forge/noarch::unicodecsv==0.14.1=py_1
  - conda-forge/noarch::cookiecutter==1.7.3=pyh6c4a22f_1
  - conda-forge/noarch::sphinxcontrib-jsmath==1.0.1=py_0
  - conda-forge/noarch::beautifulsoup4==4.11.1=pyha770c72_0
  - conda-forge/linux-64::py-lief==0.11.5=py38h709712a_1
  - conda-forge/noarch::python-fastjsonschema==2.15.3=pyhd8ed1ab_0
  - conda-forge/linux-64::jedi==0.18.1=py38h578d9bd_1
  - conda-forge/noarch::platformdirs==2.5.1=pyhd8ed1ab_0
  - conda-forge/noarch::binaryornot==0.4.4=py_1
  - conda-forge/noarch::text-unidecode==1.3=py_0
  - conda-forge/linux-64::pathlib2==2.3.7.post1=py38h578d9bd_1
  - conda-forge/linux-64::anyio==3.6.1=py38h578d9bd_0
  - conda-forge/noarch::singledispatch==3.6.1=pyh44b312d_0
  - conda-forge/linux-64::mkl_fft==1.3.1=py38h887cb03_3
  - conda-forge/linux-64::mkl_random==1.2.2=py38h5ca245f_1
  - conda-forge/linux-64::cython==0.29.30=py38hfa26641_0
  - conda-forge/noarch::mpmath==1.2.1=pyhd8ed1ab_0
  - conda-forge/noarch::parso==0.8.3=pyhd8ed1ab_0
  - conda-forge/noarch::xlrd==2.0.1=pyhd8ed1ab_3
  - conda-forge/linux-64::terminado==0.15.0=py38h578d9bd_0
  - conda-forge/noarch::sphinxcontrib-devhelp==1.0.2=py_0
  - conda-forge/noarch::cached_property==1.5.2=pyha770c72_1
  - conda-forge/noarch::packaging==21.3=pyhd8ed1ab_0
  - conda-forge/linux-64::certifi==2022.5.18.1=py38h578d9bd_0
  - conda-forge/noarch::iniconfig==1.1.1=pyh9f0ad1d_0
  - conda-forge/noarch::tqdm==4.64.0=pyhd8ed1ab_0
  - conda-forge/noarch::pytz==2022.1=pyhd8ed1ab_0
  - conda-forge/linux-64::rtree==1.0.0=py38h02d302b_1
  - conda-forge/noarch::zipp==3.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::nbconvert-pandoc==6.5.0=pyhd8ed1ab_0
  - conda-forge/linux-64::wrapt==1.14.1=py38h0a891b7_0
  - conda-forge/noarch::anaconda-client==1.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::patsy==0.5.2=pyhd8ed1ab_0
  - conda-forge/noarch::dask==2022.5.2=pyhd8ed1ab_0
  - conda-forge/linux-64::readline==8.1=h46c0cb4_0
  - conda-forge/noarch::backports.tempfile==1.0=py_0
  - conda-forge/linux-64::bottleneck==1.3.4=py38h71d37f0_1
  - conda-forge/noarch::filelock==3.7.0=pyhd8ed1ab_0
  - conda-forge/noarch::pyxdg==0.27=pyhd8ed1ab_0
  - conda-forge/noarch::contextlib2==21.6.0=pyhd8ed1ab_0
  - conda-forge/noarch::tinycss2==1.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::unidecode==1.3.4=pyhd8ed1ab_0
  - conda-forge/noarch::conda-content-trust==0.1.3=pyhd8ed1ab_0
  - conda-forge/linux-64::mock==4.0.3=py38h578d9bd_3
  - conda-forge/noarch::toml==0.10.2=pyhd8ed1ab_0
  - conda-forge/linux-64::nss==3.78=h2350873_0
  - conda-forge/noarch::websocket-client==1.3.2=pyhd8ed1ab_0
  - conda-forge/noarch::json5==0.9.5=pyh9f0ad1d_0
  - conda-forge/noarch::typing-extensions==4.2.0=hd8ed1ab_1
  - conda-forge/noarch::heapdict==1.0.1=py_0
  - conda-forge/noarch::pyls-spyder==0.4.0=pyhd8ed1ab_0
  - conda-forge/noarch::testpath==0.6.0=pyhd8ed1ab_0
  - conda-forge/linux-64::debugpy==1.6.0=py38hfa26641_0
  - conda-forge/noarch::colorama==0.4.4=pyh9f0ad1d_0
  - conda-forge/linux-64::numexpr==2.7.3=py38h43a58ef_0
  - conda-forge/linux-64::pyqt-impl==5.12.3=py38h0ffb2e6_8
  - conda-forge/linux-64::cryptography==37.0.2=py38h2b5fc30_0
  - conda-forge/noarch::backports.weakref==1.0.post1=pyhd8ed1ab_1003
  - conda-forge/noarch::imagesize==1.3.0=pyhd8ed1ab_0
  - defaults/linux-64::zope==1.0=py38_1
  - conda-forge/linux-64::mkl-service==2.4.0=py38ha7038f1_0
  - defaults/linux-64::conda-build==3.21.4=py38h06a4308_0
  - conda-forge/linux-64::argon2-cffi-bindings==21.2.0=py38h0a891b7_2
  - conda-forge/linux-64::regex==2022.4.24=py38h0a891b7_0
  - conda-forge/noarch::conda-pack==0.7.0=pyh6c4a22f_0
  - conda-forge/linux-64::pytables==3.6.1=py38hc386592_3
  - conda-forge/linux-64::python_abi==3.8=2_cp38
  - conda-forge/noarch::partd==1.2.0=pyhd8ed1ab_0
  - conda-forge/linux-64::sympy==1.10.1=py38h578d9bd_0
  - conda-forge/noarch::pygments==2.12.0=pyhd8ed1ab_0
  - conda-forge/noarch::locket==1.0.0=pyhd8ed1ab_0
  - conda-forge/linux-64::bitarray==2.5.1=py38h0a891b7_0
  - conda-forge/linux-64::click==8.1.3=py38h578d9bd_0
  - conda-forge/noarch::importlib_metadata==4.11.4=hd8ed1ab_0
  - conda-forge/linux-64::lz4==4.0.0=py38h1bf946c_2
  - conda-forge/noarch::munkres==1.1.4=pyh9f0ad1d_0
  - conda-forge/noarch::toolz==0.11.2=pyhd8ed1ab_0
  - conda-forge/linux-64::ipython==7.33.0=py38h578d9bd_0
  - conda-forge/noarch::nbclient==0.6.3=pyhd8ed1ab_0
  - conda-forge/noarch::inflection==0.5.1=pyh9f0ad1d_0
  - conda-forge/noarch::wheel==0.37.1=pyhd8ed1ab_0
  - defaults/linux-64::get_terminal_size==1.0.0=haa9412d_0
  - conda-forge/noarch::pickleshare==0.7.5=py_1003
  - conda-forge/linux-64::pyqt5-sip==4.19.18=py38h709712a_8
  - conda-forge/linux-64::pillow==9.1.1=py38h0ee0e06_1
  - conda-forge/noarch::argh==0.26.2=pyh9f0ad1d_1002
  - conda-forge/noarch::jupyterlab_pygments==0.2.2=pyhd8ed1ab_0
  - defaults/linux-64::navigator-updater==0.2.1=py38_0
  - conda-forge/noarch::more-itertools==8.13.0=pyhd8ed1ab_0
  - conda-forge/linux-64::chardet==4.0.0=py38h578d9bd_3
  - conda-forge/noarch::alabaster==0.7.12=py_0
  - conda-forge/linux-64::mypy_extensions==0.4.3=py38h578d9bd_5
  - conda-forge/noarch::qdarkstyle==3.0.3=pyhd8ed1ab_0
  - conda-forge/noarch::textdistance==4.2.2=pyhd8ed1ab_0
  - conda-forge/noarch::jinja2==3.1.2=pyhd8ed1ab_0
  - conda-forge/linux-64::pyodbc==4.0.32=py38h709712a_1
  - conda-forge/noarch::tblib==1.7.0=pyhd8ed1ab_0
  - conda-forge/noarch::xmltodict==0.13.0=pyhd8ed1ab_0
  - conda-forge/noarch::backports.functools_lru_cache==1.6.4=pyhd8ed1ab_0
  - conda-forge/linux-64::numpy==1.20.3=py38h9894fe3_0
  - conda-forge/linux-64::lxml==4.8.0=py38h0a891b7_2
  - conda-forge/noarch::python-slugify==6.1.2=pyhd8ed1ab_0
  - conda-forge/linux-64::sqlite==3.38.5=h4ff8645_0
  - conda-forge/linux-64::pycosat==0.6.3=py38h0a891b7_1010
  - conda-forge/linux-64::kiwisolver==1.4.2=py38h43d8883_1
  - conda-forge/linux-64::jellyfish==0.9.0=py38h0a891b7_1
  - conda-forge/linux-64::zope.interface==5.4.0=py38h0a891b7_2
  - conda-forge/linux-64::conda-package-handling==1.8.1=py38h0a891b7_1
  - conda-forge/noarch::prompt_toolkit==3.0.29=hd8ed1ab_0
  - conda-forge/noarch::sortedcollections==2.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::olefile==0.46=pyh9f0ad1d_1
  - conda-forge/linux-64::watchdog==2.1.8=py38h578d9bd_1
  - conda-forge/noarch::sphinxcontrib-qthelp==1.0.3=py_0
  - conda-forge/linux-64::psutil==5.9.1=py38h0a891b7_0
  - conda-forge/noarch::attrs==21.4.0=pyhd8ed1ab_0
  - conda-forge/linux-64::numba==0.55.1=py38hdc3674a_1
  - conda-forge/noarch::asn1crypto==1.5.1=pyhd8ed1ab_0
  - conda-forge/linux-64::pysocks==1.7.1=py38h578d9bd_5
  - conda-forge/noarch::pyopenssl==22.0.0=pyhd8ed1ab_0
  - conda-forge/noarch::dataclasses==0.8=pyhc8e2a94_3
  - conda-forge/linux-64::pywavelets==1.3.0=py38h71d37f0_1
  - conda-forge/noarch::sphinxcontrib-serializinghtml==1.1.5=pyhd8ed1ab_2
  - conda-forge/noarch::werkzeug==2.1.2=pyhd8ed1ab_1
  - conda-forge/noarch::networkx==2.8.2=pyhd8ed1ab_0
  - conda-forge/noarch::nose==1.3.7=py_1006
  - defaults/noarch::conda-token==0.3.0=pyhd3eb1b0_0
  - conda-forge/linux-64::pyzmq==23.0.0=py38hfc09fa9_0
  - conda-forge/noarch::distributed==2022.5.2=pyhd8ed1ab_0
  - conda-forge/linux-64::spyder==5.3.1=py38h578d9bd_0
  - conda-forge/linux-64::future==0.18.2=py38h578d9bd_5
  - defaults/linux-64::bkcharts==0.2=py38_0
  - conda-forge/noarch::jupyterlab==3.4.2=pyhd8ed1ab_0
  - conda-forge/noarch::et_xmlfile==1.0.1=py_1001
  - conda-forge/noarch::rope==1.1.1=pyhd8ed1ab_0
  - conda-forge/linux-64::jupyter==1.0.0=py38h578d9bd_7
  - defaults/noarch::conda-verify==3.4.2=py_1
  - conda-forge/linux-64::pycurl==7.45.1=py38h61f0cdf_1
  - conda-forge/noarch::flask==2.1.2=pyhd8ed1ab_1
  - conda-forge/noarch::dask-core==2022.5.2=pyhd8ed1ab_0
  - conda-forge/noarch::jinja2-time==0.2.0=pyhd8ed1ab_3
  - conda-forge/noarch::qtconsole-base==5.3.0=pyha770c72_0
  - conda-forge/noarch::nbconvert-core==6.5.0=pyhd8ed1ab_0
  - conda-forge/linux-64::pyqtchart==5.12=py38h7400c14_8
  - conda-forge/noarch::sortedcontainers==2.4.0=pyhd8ed1ab_0
  - conda-forge/linux-64::astropy==5.1=py38h71d37f0_0
  - conda-forge/noarch::xlwt==1.3.0=py_1
  - conda-forge/noarch::seaborn-base==0.11.2=pyhd8ed1ab_0
  - conda-forge/linux-64::fastcache==1.1.0=py38h0a891b7_4
  - conda-forge/noarch::jdcal==1.4.1=py_0
  - conda-forge/noarch::notebook==6.4.11=pyha770c72_0
  - conda-forge/linux-64::sniffio==1.2.0=py38h578d9bd_3
  - conda-forge/noarch::async_generator==1.10=py_0
  - conda-forge/noarch::charset-normalizer==2.0.12=pyhd8ed1ab_0
  - conda-forge/noarch::prompt-toolkit==3.0.29=pyha770c72_0
  - conda-forge/linux-64::secretstorage==3.3.2=py38h578d9bd_1
  - conda-forge/linux-64::matplotlib-base==3.5.2=py38h826bfd8_0
  - conda-forge/noarch::diff-match-patch==20200713=pyh9f0ad1d_0
  - defaults/linux-64::sphinxcontrib==1.0=py38_1
  - conda-forge/linux-64::pytest==7.1.2=py38h578d9bd_0
  - conda-forge/noarch::webencodings==0.5.1=py_1
  - conda-forge/noarch::nest-asyncio==1.5.5=pyhd8ed1ab_0
  - conda-forge/noarch::snowballstemmer==2.2.0=pyhd8ed1ab_0
  - conda-forge/linux-64::unicodedata2==14.0.0=py38h0a891b7_1
  - conda-forge/linux-64::pyqt==5.12.3=py38h578d9bd_8
  - conda-forge/noarch::babel==2.10.1=pyhd8ed1ab_0
  - conda-forge/noarch::pyflakes==2.4.0=pyhd8ed1ab_0
  - conda-forge/noarch::itsdangerous==2.1.2=pyhd8ed1ab_0
  - conda-forge/linux-64::greenlet==1.1.2=py38hfa26641_2
  - conda-forge/linux-64::pyyaml==6.0=py38h0a891b7_4
  - conda-forge/linux-64::python==3.8.13=h582c2e5_0_cpython
  - conda-forge/noarch::whichcraft==0.6.1=py_0
  - conda-forge/noarch::tifffile==2021.10.12=pyhd8ed1ab_0
  - conda-forge/noarch::sphinxcontrib-htmlhelp==2.0.0=pyhd8ed1ab_0
  - conda-forge/noarch::pkginfo==1.8.2=pyhd8ed1ab_0
  - conda-forge/linux-64::keyring==23.5.1=py38h578d9bd_0
  - conda-forge/linux-64::libpq==13.5=hd57d9b9_1
  - conda-forge/linux-64::matplotlib==3.5.2=py38h578d9bd_0
  - defaults/linux-64::_anaconda_depends==2021.11=py38_0
  - conda-forge/linux-64::statsmodels==0.13.2=py38h6c62de6_0
  - conda-forge/noarch::bleach==5.0.0=pyhd8ed1ab_0
  - conda-forge/linux-64::h5py==3.2.1=nompi_py38h9915d05_100
  - conda-forge/linux-64::spyder-kernels==2.3.1=py38h578d9bd_0
  - conda-forge/noarch::dill==0.3.5.1=pyhd8ed1ab_0
  - conda-forge/noarch::clyent==1.2.2=py_1
  - conda-forge/linux-64::ruamel_yaml==0.15.80=py38h0a891b7_1007
  - conda-forge/noarch::qtpy==2.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::importlib_resources==5.7.1=pyhd8ed1ab_1
  - conda-forge/noarch::numpydoc==1.2.1=pyhd8ed1ab_0
  - conda-forge/linux-64::setuptools==62.3.2=py38h578d9bd_0
  - conda-forge/noarch::ipython_genutils==0.2.0=py_1
  - conda-forge/noarch::cached-property==1.5.2=hd8ed1ab_1
  - conda-forge/noarch::prometheus_client==0.14.1=pyhd8ed1ab_0
  - conda-forge/noarch::jupyter_server==1.17.0=pyhd8ed1ab_0
  - conda-forge/noarch::matplotlib-inline==0.1.3=pyhd8ed1ab_0
  - conda-forge/noarch::zope.event==4.5.0=pyh9f0ad1d_0
  - conda-forge/linux-64::typed-ast==1.5.4=py38h0a891b7_0
  - conda-forge/linux-64::tornado==6.1=py38h0a891b7_3
  - conda-forge/noarch::poyo==0.5.0=py_0
  - conda-forge/linux-64::sip==6.5.1=py38h709712a_2
  - conda-forge/linux-64::widgetsnbextension==3.6.0=py38h578d9bd_0
  - conda-forge/noarch::sphinxcontrib-applehelp==1.0.2=py_0
  - conda-forge/noarch::imageio==2.19.2=pyhcf75d05_0
  - conda-forge/linux-64::jupyter_core==4.10.0=py38h578d9bd_0
  - conda-forge/noarch::wcwidth==0.2.5=pyh9f0ad1d_2
  - conda-forge/noarch::typing_extensions==4.2.0=pyha770c72_1
  - conda-forge/noarch::path.py==12.5.0=0
  - conda-forge/noarch::python-lsp-server==1.4.1=pyhd8ed1ab_1
  - conda-forge/noarch::seaborn==0.11.2=hd8ed1ab_0
  - conda-forge/linux-64::scikit-learn==1.1.1=py38hf80bbf7_0
  - conda-forge/noarch::nbconvert==6.5.0=pyhd8ed1ab_0
  - conda-forge/noarch::python-lsp-black==1.2.1=pyhd8ed1ab_0
  - conda-forge/linux-64::qt==5.12.9=hda022c4_4
  - conda-forge/noarch::nltk==3.6.7=pyhd8ed1ab_0
  - conda-forge/linux-64::imagecodecs==2021.8.26=py38hb5ce8f7_1
  - conda-forge/noarch::sphinxcontrib-websupport==1.2.4=pyhd8ed1ab_1
  - conda-forge/linux-64::pluggy==1.0.0=py38h578d9bd_3
  - conda-forge/linux-64::bokeh==2.4.3=py38h578d9bd_0
  - conda-forge/noarch::six==1.16.0=pyh6c4a22f_0
  - conda-forge/linux-64::lazy-object-proxy==1.7.1=py38h0a891b7_1
  - conda-forge/noarch::ptyprocess==0.7.0=pyhd3deb0d_0
  - defaults/noarch::conda-repo-cli==1.0.4=pyhd3eb1b0_0
  - conda-forge/linux-64::importlib-metadata==4.11.4=py38h578d9bd_0
  - conda-forge/noarch::pycodestyle==2.8.0=pyhd8ed1ab_0
  - conda-forge/linux-64::conda==4.12.0=py38h578d9bd_0
  - conda-forge/linux-64::markupsafe==2.1.1=py38h0a891b7_1
  - conda-forge/linux-64::sqlalchemy==1.4.36=py38h0a891b7_0
  - conda-forge/noarch::jeepney==0.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::argon2-cffi==21.3.0=pyhd8ed1ab_0
  - defaults/linux-64::anaconda-navigator==2.0.3=py38_0
  - defaults/linux-64::numpy-base==1.18.5=py38h2f8d375_0
  - conda-forge/noarch::urllib3==1.26.9=pyhd8ed1ab_0
  - conda-forge/noarch::jupyterlab_server==2.14.0=pyhd8ed1ab_0
  - conda-forge/noarch::pathspec==0.9.0=pyhd8ed1ab_0
  - conda-forge/noarch::nbformat==5.4.0=pyhd8ed1ab_0
  - conda-forge/noarch::black==22.3.0=pyhd8ed1ab_0
  - conda-forge/linux-64::docutils==0.18.1=py38h578d9bd_1
  - conda-forge/noarch::pip==22.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::backports.shutil_get_terminal_size==1.0.0=py_3
  - conda-forge/linux-64::glib==2.70.2=h780b84a_4
  - conda-forge/noarch::idna==3.3=pyhd8ed1ab_0
  - conda-forge/noarch::xlsxwriter==3.0.3=pyhd8ed1ab_0
  - conda-forge/linux-64::cytoolz==0.11.2=py38h0a891b7_2
  - conda-forge/noarch::pydocstyle==6.1.1=pyhd8ed1ab_0
  - conda-forge/linux-64::mistune==0.8.4=py38h497a2fe_1005
  - conda-forge/linux-64::scikit-learn-intelex==2021.5.0=py38h578d9bd_1
  - conda-forge/noarch::entrypoints==0.4=pyhd8ed1ab_0
  - conda-forge/noarch::fsspec==2022.5.0=pyhd8ed1ab_0
  - conda-forge/noarch::ply==3.11=py_1
  - conda-forge/noarch::defusedxml==0.7.1=pyhd8ed1ab_0
  - conda-forge/noarch::send2trash==1.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::qtconsole==5.3.0=pyhd8ed1ab_0
  - conda-forge/noarch::cloudpickle==2.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::anaconda-project==0.10.2=pyhd8ed1ab_0
  - conda-forge/linux-64::tbb4py==2021.5.0=py38he21e921_1
  - conda-forge/noarch::notebook-shim==0.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::soupsieve==2.3.1=pyhd8ed1ab_0
  - conda-forge/linux-64::astroid==2.11.5=py38h578d9bd_0
  - conda-forge/linux-64::scipy==1.5.3=py38h828c644_0
  - conda-forge/linux-64::python-libarchive-c==4.0=py38h578d9bd_1
  - conda-forge/noarch::threadpoolctl==3.1.0=pyh8a188c0_0
  - conda-forge/linux-64::ipykernel==6.13.0=py38h7f3c49e_0
done

==> WARNING: A newer version of conda exists. <==
  current version: 4.12.0
  latest version: 4.13.0

Please update conda by running

    $ conda update -n base conda

# All requested packages already installed.

Also trying conda install -n base conda=4.13.0 did not work, just installed one package, readline, (I've found this command above here in this issue):

❯ conda install -n base conda=4.13.0
Collecting package metadata (current_repodata.json): done
Solving environment: \ 
The environment is inconsistent, please check the package plan carefully
The following packages are causing the inconsistency:

  - defaults/linux-64::anaconda==custom=py38_1
  - conda-forge/linux-64::scikit-image==0.19.2=py38h43a58ef_0
  - conda-forge/noarch::jupyter_client==7.3.1=pyhd8ed1ab_0
  - conda-forge/noarch::intervaltree==3.0.2=py_0
  - conda-forge/noarch::html5lib==1.1=pyh9f0ad1d_0
  - conda-forge/noarch::backcall==0.2.0=pyh9f0ad1d_0
  - defaults/linux-64::_ipyw_jlab_nb_ext_conf==0.1.0=py38_0
  - conda-forge/linux-64::fonttools==4.33.3=py38h0a891b7_0
  - conda-forge/linux-64::gevent==21.12.0=py38h0a891b7_1
  - conda-forge/noarch::isort==5.10.1=pyhd8ed1ab_0
  - conda-forge/linux-64::brotlipy==0.7.0=py38h0a891b7_1004
  - conda-forge/noarch::backports==1.0=py_2
  - conda-forge/noarch::jupyter_console==6.4.3=pyhd8ed1ab_0
  - conda-forge/noarch::mccabe==0.6.1=py_1
  - conda-forge/noarch::nbclassic==0.3.7=pyhd8ed1ab_0
  - conda-forge/linux-64::llvmlite==0.38.1=py38h38d86a4_0
  - conda-forge/noarch::cycler==0.11.0=pyhd8ed1ab_0
  - conda-forge/noarch::flake8==4.0.1=pyhd8ed1ab_2
  - conda-forge/noarch::sphinx==5.0.0=pyh6c4a22f_1
  - conda-forge/noarch::ipywidgets==7.7.0=pyhd8ed1ab_0
  - conda-forge/noarch::requests==2.27.1=pyhd8ed1ab_0
  - conda-forge/noarch::pylint==2.13.9=pyhd8ed1ab_1
  - conda-forge/linux-64::ujson==5.3.0=py38hfa26641_0
  - conda-forge/noarch::appdirs==1.4.4=pyh9f0ad1d_0
  - conda-forge/noarch::traitlets==5.2.1.post0=pyhd8ed1ab_0
  - defaults/linux-64::daal4py==2021.5.0=py38h78b71dc_0
  - conda-forge/linux-64::msgpack-python==1.0.3=py38h43d8883_1
  - conda-forge/noarch::glob2==0.7=py_0
  - conda-forge/noarch::yapf==0.32.0=pyhd8ed1ab_0
  - conda-forge/noarch::autopep8==1.6.0=pyhd8ed1ab_1
  - conda-forge/linux-64::pandas==1.4.2=py38h47df419_2
  - conda-forge/noarch::three-merge==0.1.1=pyh9f0ad1d_0
  - conda-forge/noarch::joblib==1.1.0=pyhd8ed1ab_0
  - conda-forge/linux-64::pyqtwebengine==5.12.1=py38h7400c14_8
  - conda-forge/noarch::decorator==5.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::pandocfilters==1.5.0=pyhd8ed1ab_0
  - conda-forge/linux-64::cffi==1.15.0=py38h3931269_0
  - conda-forge/noarch::pep8==1.7.1=py_0
  - conda-forge/noarch::qtawesome==1.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::wurlitzer==3.0.2=pyhd8ed1ab_2
  - conda-forge/noarch::pyparsing==3.0.9=pyhd8ed1ab_0
  - conda-forge/noarch::tinycss==0.4=pyhd8ed1ab_1002
  - conda-forge/noarch::boto==2.49.0=py_0
  - conda-forge/noarch::python-dateutil==2.8.2=pyhd8ed1ab_0
  - conda-forge/noarch::py==1.11.0=pyh6c4a22f_0
  - conda-forge/noarch::flit-core==3.7.1=pyhd8ed1ab_0
  - conda-forge/linux-64::pyerfa==2.0.0.1=py38h71d37f0_2
  - conda-forge/noarch::jupyterlab_widgets==1.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::python-lsp-jsonrpc==1.0.0=pyhd8ed1ab_0
  - conda-forge/noarch::pycparser==2.21=pyhd8ed1ab_0
  - conda-forge/noarch::zict==2.2.0=pyhd8ed1ab_0
  - conda-forge/noarch::qstylizer==0.2.1=pyhd8ed1ab_0
  - conda-forge/noarch::arrow==1.2.2=pyhd8ed1ab_0
  - conda-forge/linux-64::path==16.4.0=py38h578d9bd_1
  - conda-forge/linux-64::pyrsistent==0.18.1=py38h0a891b7_1
  - conda-forge/noarch::tomli==2.0.1=pyhd8ed1ab_0
  - conda-forge/noarch::simplegeneric==0.8.1=py_1
  - conda-forge/noarch::jsonschema==4.5.1=pyhd8ed1ab_0
  - conda-forge/noarch::pexpect==4.8.0=pyh9f0ad1d_2
  - conda-forge/linux-64::gmpy2==2.1.2=py38h8384b0a_0
  - conda-forge/noarch::multipledispatch==0.6.0=py_0
  - conda-forge/noarch::openpyxl==3.0.9=pyhd8ed1ab_0
  - conda-forge/noarch::atomicwrites==1.4.0=pyh9f0ad1d_0
  - conda-forge/noarch::unicodecsv==0.14.1=py_1
  - conda-forge/noarch::cookiecutter==1.7.3=pyh6c4a22f_1
  - conda-forge/noarch::sphinxcontrib-jsmath==1.0.1=py_0
  - conda-forge/noarch::beautifulsoup4==4.11.1=pyha770c72_0
  - conda-forge/linux-64::py-lief==0.11.5=py38h709712a_1
  - conda-forge/noarch::python-fastjsonschema==2.15.3=pyhd8ed1ab_0
  - conda-forge/linux-64::jedi==0.18.1=py38h578d9bd_1
  - conda-forge/noarch::platformdirs==2.5.1=pyhd8ed1ab_0
  - conda-forge/noarch::binaryornot==0.4.4=py_1
  - conda-forge/noarch::text-unidecode==1.3=py_0
  - conda-forge/linux-64::pathlib2==2.3.7.post1=py38h578d9bd_1
  - conda-forge/linux-64::anyio==3.6.1=py38h578d9bd_0
  - conda-forge/noarch::singledispatch==3.6.1=pyh44b312d_0
  - conda-forge/linux-64::mkl_fft==1.3.1=py38h887cb03_3
  - conda-forge/linux-64::mkl_random==1.2.2=py38h5ca245f_1
  - conda-forge/linux-64::cython==0.29.30=py38hfa26641_0
  - conda-forge/noarch::mpmath==1.2.1=pyhd8ed1ab_0
  - conda-forge/noarch::parso==0.8.3=pyhd8ed1ab_0
  - conda-forge/noarch::xlrd==2.0.1=pyhd8ed1ab_3
  - conda-forge/linux-64::terminado==0.15.0=py38h578d9bd_0
  - conda-forge/noarch::sphinxcontrib-devhelp==1.0.2=py_0
  - conda-forge/noarch::cached_property==1.5.2=pyha770c72_1
  - conda-forge/noarch::packaging==21.3=pyhd8ed1ab_0
  - conda-forge/linux-64::certifi==2022.5.18.1=py38h578d9bd_0
  - conda-forge/noarch::iniconfig==1.1.1=pyh9f0ad1d_0
  - conda-forge/noarch::tqdm==4.64.0=pyhd8ed1ab_0
  - conda-forge/noarch::pytz==2022.1=pyhd8ed1ab_0
  - conda-forge/linux-64::rtree==1.0.0=py38h02d302b_1
  - conda-forge/noarch::zipp==3.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::nbconvert-pandoc==6.5.0=pyhd8ed1ab_0
  - conda-forge/linux-64::wrapt==1.14.1=py38h0a891b7_0
  - conda-forge/noarch::anaconda-client==1.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::patsy==0.5.2=pyhd8ed1ab_0
  - conda-forge/noarch::dask==2022.5.2=pyhd8ed1ab_0
  - conda-forge/linux-64::readline==8.1=h46c0cb4_0
  - conda-forge/noarch::backports.tempfile==1.0=py_0
  - conda-forge/linux-64::bottleneck==1.3.4=py38h71d37f0_1
  - conda-forge/noarch::filelock==3.7.0=pyhd8ed1ab_0
  - conda-forge/noarch::pyxdg==0.27=pyhd8ed1ab_0
  - conda-forge/noarch::contextlib2==21.6.0=pyhd8ed1ab_0
  - conda-forge/noarch::tinycss2==1.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::unidecode==1.3.4=pyhd8ed1ab_0
  - conda-forge/noarch::conda-content-trust==0.1.3=pyhd8ed1ab_0
  - conda-forge/linux-64::mock==4.0.3=py38h578d9bd_3
  - conda-forge/noarch::toml==0.10.2=pyhd8ed1ab_0
  - conda-forge/linux-64::nss==3.78=h2350873_0
  - conda-forge/noarch::websocket-client==1.3.2=pyhd8ed1ab_0
  - conda-forge/noarch::json5==0.9.5=pyh9f0ad1d_0
  - conda-forge/noarch::typing-extensions==4.2.0=hd8ed1ab_1
  - conda-forge/noarch::heapdict==1.0.1=py_0
  - conda-forge/noarch::pyls-spyder==0.4.0=pyhd8ed1ab_0
  - conda-forge/noarch::testpath==0.6.0=pyhd8ed1ab_0
  - conda-forge/linux-64::debugpy==1.6.0=py38hfa26641_0
  - conda-forge/noarch::colorama==0.4.4=pyh9f0ad1d_0
  - conda-forge/linux-64::numexpr==2.7.3=py38h43a58ef_0
  - conda-forge/linux-64::pyqt-impl==5.12.3=py38h0ffb2e6_8
  - conda-forge/linux-64::cryptography==37.0.2=py38h2b5fc30_0
  - conda-forge/noarch::backports.weakref==1.0.post1=pyhd8ed1ab_1003
  - conda-forge/noarch::imagesize==1.3.0=pyhd8ed1ab_0
  - defaults/linux-64::zope==1.0=py38_1
  - conda-forge/linux-64::mkl-service==2.4.0=py38ha7038f1_0
  - defaults/linux-64::conda-build==3.21.4=py38h06a4308_0
  - conda-forge/linux-64::argon2-cffi-bindings==21.2.0=py38h0a891b7_2
  - conda-forge/linux-64::regex==2022.4.24=py38h0a891b7_0
  - conda-forge/noarch::conda-pack==0.7.0=pyh6c4a22f_0
  - conda-forge/linux-64::pytables==3.6.1=py38hc386592_3
  - conda-forge/linux-64::python_abi==3.8=2_cp38
  - conda-forge/noarch::partd==1.2.0=pyhd8ed1ab_0
  - conda-forge/linux-64::sympy==1.10.1=py38h578d9bd_0
  - conda-forge/noarch::pygments==2.12.0=pyhd8ed1ab_0
  - conda-forge/noarch::locket==1.0.0=pyhd8ed1ab_0
  - conda-forge/linux-64::bitarray==2.5.1=py38h0a891b7_0
  - conda-forge/linux-64::click==8.1.3=py38h578d9bd_0
  - conda-forge/noarch::importlib_metadata==4.11.4=hd8ed1ab_0
  - conda-forge/linux-64::lz4==4.0.0=py38h1bf946c_2
  - conda-forge/noarch::munkres==1.1.4=pyh9f0ad1d_0
  - conda-forge/noarch::toolz==0.11.2=pyhd8ed1ab_0
  - conda-forge/linux-64::ipython==7.33.0=py38h578d9bd_0
  - conda-forge/noarch::nbclient==0.6.3=pyhd8ed1ab_0
  - conda-forge/noarch::inflection==0.5.1=pyh9f0ad1d_0
  - conda-forge/noarch::wheel==0.37.1=pyhd8ed1ab_0
  - defaults/linux-64::get_terminal_size==1.0.0=haa9412d_0
  - conda-forge/noarch::pickleshare==0.7.5=py_1003
  - conda-forge/linux-64::pyqt5-sip==4.19.18=py38h709712a_8
  - conda-forge/linux-64::pillow==9.1.1=py38h0ee0e06_1
  - conda-forge/noarch::argh==0.26.2=pyh9f0ad1d_1002
  - conda-forge/noarch::jupyterlab_pygments==0.2.2=pyhd8ed1ab_0
  - defaults/linux-64::navigator-updater==0.2.1=py38_0
  - conda-forge/noarch::more-itertools==8.13.0=pyhd8ed1ab_0
  - conda-forge/linux-64::chardet==4.0.0=py38h578d9bd_3
  - conda-forge/noarch::alabaster==0.7.12=py_0
  - conda-forge/linux-64::mypy_extensions==0.4.3=py38h578d9bd_5
  - conda-forge/noarch::qdarkstyle==3.0.3=pyhd8ed1ab_0
  - conda-forge/noarch::textdistance==4.2.2=pyhd8ed1ab_0
  - conda-forge/noarch::jinja2==3.1.2=pyhd8ed1ab_0
  - conda-forge/linux-64::pyodbc==4.0.32=py38h709712a_1
  - conda-forge/noarch::tblib==1.7.0=pyhd8ed1ab_0
  - conda-forge/noarch::xmltodict==0.13.0=pyhd8ed1ab_0
  - conda-forge/noarch::backports.functools_lru_cache==1.6.4=pyhd8ed1ab_0
  - conda-forge/linux-64::numpy==1.20.3=py38h9894fe3_0
  - conda-forge/linux-64::lxml==4.8.0=py38h0a891b7_2
  - conda-forge/noarch::python-slugify==6.1.2=pyhd8ed1ab_0
  - conda-forge/linux-64::sqlite==3.38.5=h4ff8645_0
  - conda-forge/linux-64::pycosat==0.6.3=py38h0a891b7_1010
  - conda-forge/linux-64::kiwisolver==1.4.2=py38h43d8883_1
  - conda-forge/linux-64::jellyfish==0.9.0=py38h0a891b7_1
  - conda-forge/linux-64::zope.interface==5.4.0=py38h0a891b7_2
  - conda-forge/linux-64::conda-package-handling==1.8.1=py38h0a891b7_1
  - conda-forge/noarch::prompt_toolkit==3.0.29=hd8ed1ab_0
  - conda-forge/noarch::sortedcollections==2.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::olefile==0.46=pyh9f0ad1d_1
  - conda-forge/linux-64::watchdog==2.1.8=py38h578d9bd_1
  - conda-forge/noarch::sphinxcontrib-qthelp==1.0.3=py_0
  - conda-forge/linux-64::psutil==5.9.1=py38h0a891b7_0
  - conda-forge/noarch::attrs==21.4.0=pyhd8ed1ab_0
  - conda-forge/linux-64::numba==0.55.1=py38hdc3674a_1
  - conda-forge/noarch::asn1crypto==1.5.1=pyhd8ed1ab_0
  - conda-forge/linux-64::pysocks==1.7.1=py38h578d9bd_5
  - conda-forge/noarch::pyopenssl==22.0.0=pyhd8ed1ab_0
  - conda-forge/noarch::dataclasses==0.8=pyhc8e2a94_3
  - conda-forge/linux-64::pywavelets==1.3.0=py38h71d37f0_1
  - conda-forge/noarch::sphinxcontrib-serializinghtml==1.1.5=pyhd8ed1ab_2
  - conda-forge/noarch::werkzeug==2.1.2=pyhd8ed1ab_1
  - conda-forge/noarch::networkx==2.8.2=pyhd8ed1ab_0
  - conda-forge/noarch::nose==1.3.7=py_1006
  - defaults/noarch::conda-token==0.3.0=pyhd3eb1b0_0
  - conda-forge/linux-64::pyzmq==23.0.0=py38hfc09fa9_0
  - conda-forge/noarch::distributed==2022.5.2=pyhd8ed1ab_0
  - conda-forge/linux-64::spyder==5.3.1=py38h578d9bd_0
  - conda-forge/linux-64::future==0.18.2=py38h578d9bd_5
  - defaults/linux-64::bkcharts==0.2=py38_0
  - conda-forge/noarch::jupyterlab==3.4.2=pyhd8ed1ab_0
  - conda-forge/noarch::et_xmlfile==1.0.1=py_1001
  - conda-forge/noarch::rope==1.1.1=pyhd8ed1ab_0
  - conda-forge/linux-64::jupyter==1.0.0=py38h578d9bd_7
  - defaults/noarch::conda-verify==3.4.2=py_1
  - conda-forge/linux-64::pycurl==7.45.1=py38h61f0cdf_1
  - conda-forge/noarch::flask==2.1.2=pyhd8ed1ab_1
  - conda-forge/noarch::dask-core==2022.5.2=pyhd8ed1ab_0
  - conda-forge/noarch::jinja2-time==0.2.0=pyhd8ed1ab_3
  - conda-forge/noarch::qtconsole-base==5.3.0=pyha770c72_0
  - conda-forge/noarch::nbconvert-core==6.5.0=pyhd8ed1ab_0
  - conda-forge/linux-64::pyqtchart==5.12=py38h7400c14_8
  - conda-forge/noarch::sortedcontainers==2.4.0=pyhd8ed1ab_0
  - conda-forge/linux-64::astropy==5.1=py38h71d37f0_0
  - conda-forge/noarch::xlwt==1.3.0=py_1
  - conda-forge/noarch::seaborn-base==0.11.2=pyhd8ed1ab_0
  - conda-forge/linux-64::fastcache==1.1.0=py38h0a891b7_4
  - conda-forge/noarch::jdcal==1.4.1=py_0
  - conda-forge/noarch::notebook==6.4.11=pyha770c72_0
  - conda-forge/linux-64::sniffio==1.2.0=py38h578d9bd_3
  - conda-forge/noarch::async_generator==1.10=py_0
  - conda-forge/noarch::charset-normalizer==2.0.12=pyhd8ed1ab_0
  - conda-forge/noarch::prompt-toolkit==3.0.29=pyha770c72_0
  - conda-forge/linux-64::secretstorage==3.3.2=py38h578d9bd_1
  - conda-forge/linux-64::matplotlib-base==3.5.2=py38h826bfd8_0
  - conda-forge/noarch::diff-match-patch==20200713=pyh9f0ad1d_0
  - defaults/linux-64::sphinxcontrib==1.0=py38_1
  - conda-forge/linux-64::pytest==7.1.2=py38h578d9bd_0
  - conda-forge/noarch::webencodings==0.5.1=py_1
  - conda-forge/noarch::nest-asyncio==1.5.5=pyhd8ed1ab_0
  - conda-forge/noarch::snowballstemmer==2.2.0=pyhd8ed1ab_0
  - conda-forge/linux-64::unicodedata2==14.0.0=py38h0a891b7_1
  - conda-forge/linux-64::pyqt==5.12.3=py38h578d9bd_8
  - conda-forge/noarch::babel==2.10.1=pyhd8ed1ab_0
  - conda-forge/noarch::pyflakes==2.4.0=pyhd8ed1ab_0
  - conda-forge/noarch::itsdangerous==2.1.2=pyhd8ed1ab_0
  - conda-forge/linux-64::greenlet==1.1.2=py38hfa26641_2
  - conda-forge/linux-64::pyyaml==6.0=py38h0a891b7_4
  - conda-forge/linux-64::python==3.8.13=h582c2e5_0_cpython
  - conda-forge/noarch::whichcraft==0.6.1=py_0
  - conda-forge/noarch::tifffile==2021.10.12=pyhd8ed1ab_0
  - conda-forge/noarch::sphinxcontrib-htmlhelp==2.0.0=pyhd8ed1ab_0
  - conda-forge/noarch::pkginfo==1.8.2=pyhd8ed1ab_0
  - conda-forge/linux-64::keyring==23.5.1=py38h578d9bd_0
  - conda-forge/linux-64::libpq==13.5=hd57d9b9_1
  - conda-forge/linux-64::matplotlib==3.5.2=py38h578d9bd_0
  - defaults/linux-64::_anaconda_depends==2021.11=py38_0
  - conda-forge/linux-64::statsmodels==0.13.2=py38h6c62de6_0
  - conda-forge/noarch::bleach==5.0.0=pyhd8ed1ab_0
  - conda-forge/linux-64::h5py==3.2.1=nompi_py38h9915d05_100
  - conda-forge/linux-64::spyder-kernels==2.3.1=py38h578d9bd_0
  - conda-forge/noarch::dill==0.3.5.1=pyhd8ed1ab_0
  - conda-forge/noarch::clyent==1.2.2=py_1
  - conda-forge/linux-64::ruamel_yaml==0.15.80=py38h0a891b7_1007
  - conda-forge/noarch::qtpy==2.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::importlib_resources==5.7.1=pyhd8ed1ab_1
  - conda-forge/noarch::numpydoc==1.2.1=pyhd8ed1ab_0
  - conda-forge/linux-64::setuptools==62.3.2=py38h578d9bd_0
  - conda-forge/noarch::ipython_genutils==0.2.0=py_1
  - conda-forge/noarch::cached-property==1.5.2=hd8ed1ab_1
  - conda-forge/noarch::prometheus_client==0.14.1=pyhd8ed1ab_0
  - conda-forge/noarch::jupyter_server==1.17.0=pyhd8ed1ab_0
  - conda-forge/noarch::matplotlib-inline==0.1.3=pyhd8ed1ab_0
  - conda-forge/noarch::zope.event==4.5.0=pyh9f0ad1d_0
  - conda-forge/linux-64::typed-ast==1.5.4=py38h0a891b7_0
  - conda-forge/linux-64::tornado==6.1=py38h0a891b7_3
  - conda-forge/noarch::poyo==0.5.0=py_0
  - conda-forge/linux-64::sip==6.5.1=py38h709712a_2
  - conda-forge/linux-64::widgetsnbextension==3.6.0=py38h578d9bd_0
  - conda-forge/noarch::sphinxcontrib-applehelp==1.0.2=py_0
  - conda-forge/noarch::imageio==2.19.2=pyhcf75d05_0
  - conda-forge/linux-64::jupyter_core==4.10.0=py38h578d9bd_0
  - conda-forge/noarch::wcwidth==0.2.5=pyh9f0ad1d_2
  - conda-forge/noarch::typing_extensions==4.2.0=pyha770c72_1
  - conda-forge/noarch::path.py==12.5.0=0
  - conda-forge/noarch::python-lsp-server==1.4.1=pyhd8ed1ab_1
  - conda-forge/noarch::seaborn==0.11.2=hd8ed1ab_0
  - conda-forge/linux-64::scikit-learn==1.1.1=py38hf80bbf7_0
  - conda-forge/noarch::nbconvert==6.5.0=pyhd8ed1ab_0
  - conda-forge/noarch::python-lsp-black==1.2.1=pyhd8ed1ab_0
  - conda-forge/linux-64::qt==5.12.9=hda022c4_4
  - conda-forge/noarch::nltk==3.6.7=pyhd8ed1ab_0
  - conda-forge/linux-64::imagecodecs==2021.8.26=py38hb5ce8f7_1
  - conda-forge/noarch::sphinxcontrib-websupport==1.2.4=pyhd8ed1ab_1
  - conda-forge/linux-64::pluggy==1.0.0=py38h578d9bd_3
  - conda-forge/linux-64::bokeh==2.4.3=py38h578d9bd_0
  - conda-forge/noarch::six==1.16.0=pyh6c4a22f_0
  - conda-forge/linux-64::lazy-object-proxy==1.7.1=py38h0a891b7_1
  - conda-forge/noarch::ptyprocess==0.7.0=pyhd3deb0d_0
  - defaults/noarch::conda-repo-cli==1.0.4=pyhd3eb1b0_0
  - conda-forge/linux-64::importlib-metadata==4.11.4=py38h578d9bd_0
  - conda-forge/noarch::pycodestyle==2.8.0=pyhd8ed1ab_0
  - conda-forge/linux-64::conda==4.12.0=py38h578d9bd_0
  - conda-forge/linux-64::markupsafe==2.1.1=py38h0a891b7_1
  - conda-forge/linux-64::sqlalchemy==1.4.36=py38h0a891b7_0
  - conda-forge/noarch::jeepney==0.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::argon2-cffi==21.3.0=pyhd8ed1ab_0
  - defaults/linux-64::anaconda-navigator==2.0.3=py38_0
  - defaults/linux-64::numpy-base==1.18.5=py38h2f8d375_0
  - conda-forge/noarch::urllib3==1.26.9=pyhd8ed1ab_0
  - conda-forge/noarch::jupyterlab_server==2.14.0=pyhd8ed1ab_0
  - conda-forge/noarch::pathspec==0.9.0=pyhd8ed1ab_0
  - conda-forge/noarch::nbformat==5.4.0=pyhd8ed1ab_0
  - conda-forge/noarch::black==22.3.0=pyhd8ed1ab_0
  - conda-forge/linux-64::docutils==0.18.1=py38h578d9bd_1
  - conda-forge/noarch::pip==22.1.1=pyhd8ed1ab_0
  - conda-forge/noarch::backports.shutil_get_terminal_size==1.0.0=py_3
  - conda-forge/linux-64::glib==2.70.2=h780b84a_4
  - conda-forge/noarch::idna==3.3=pyhd8ed1ab_0
  - conda-forge/noarch::xlsxwriter==3.0.3=pyhd8ed1ab_0
  - conda-forge/linux-64::cytoolz==0.11.2=py38h0a891b7_2
  - conda-forge/noarch::pydocstyle==6.1.1=pyhd8ed1ab_0
  - conda-forge/linux-64::mistune==0.8.4=py38h497a2fe_1005
  - conda-forge/linux-64::scikit-learn-intelex==2021.5.0=py38h578d9bd_1
  - conda-forge/noarch::entrypoints==0.4=pyhd8ed1ab_0
  - conda-forge/noarch::fsspec==2022.5.0=pyhd8ed1ab_0
  - conda-forge/noarch::ply==3.11=py_1
  - conda-forge/noarch::defusedxml==0.7.1=pyhd8ed1ab_0
  - conda-forge/noarch::send2trash==1.8.0=pyhd8ed1ab_0
  - conda-forge/noarch::qtconsole==5.3.0=pyhd8ed1ab_0
  - conda-forge/noarch::cloudpickle==2.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::anaconda-project==0.10.2=pyhd8ed1ab_0
  - conda-forge/linux-64::tbb4py==2021.5.0=py38he21e921_1
  - conda-forge/noarch::notebook-shim==0.1.0=pyhd8ed1ab_0
  - conda-forge/noarch::soupsieve==2.3.1=pyhd8ed1ab_0
  - conda-forge/linux-64::astroid==2.11.5=py38h578d9bd_0
  - conda-forge/linux-64::scipy==1.5.3=py38h828c644_0
  - conda-forge/linux-64::python-libarchive-c==4.0=py38h578d9bd_1
  - conda-forge/noarch::threadpoolctl==3.1.0=pyh8a188c0_0
  - conda-forge/linux-64::ipykernel==6.13.0=py38h7f3c49e_0
done

==> WARNING: A newer version of conda exists. <==
  current version: 4.12.0
  latest version: 4.13.0

Please update conda by running

    $ conda update -n base conda

## Package Plan ##

  environment location: /home/bill/anaconda3

  added / updated specs:
    - conda=4.13.0

The following packages will be downloaded:

    package                    |            build
    ---------------------------|-----------------
    readline-8.1.2             |       h0f457ee_0         291 KB  conda-forge
    ------------------------------------------------------------
                                           Total:         291 KB

The following packages will be UPDATED:

  readline                                   8.1-h46c0cb4_0 --> 8.1.2-h0f457ee_0

Proceed ([y]/n)? y

Downloading and Extracting Packages
readline-8.1.2       | 291 KB    | ########################################################################################## | 100% 
Preparing transaction: done
Verifying transaction: done
Executing transaction: done

And this is the output of conda config --show-sources:

❯ conda config --show-sources
==> /home/bill/.condarc <==
auto_activate_base: False
changeps1: True
channels:
  - conda-forge
  - defaults

and of conda info:

❯ conda info

     active environment : None
            shell level : 0
       user config file : /home/bill/.condarc
 populated config files : /home/bill/.condarc
          conda version : 4.12.0
    conda-build version : 3.21.4
         python version : 3.8.13.final.0
       virtual packages : __cuda=11.7=0
                          __linux=5.4.0=0
                          __glibc=2.31=0
                          __unix=0=0
                          __archspec=1=x86_64
       base environment : /home/bill/anaconda3  (writable)
      conda av data dir : /home/bill/anaconda3/etc/conda
  conda av metadata url : None
           channel URLs : https://conda.anaconda.org/conda-forge/linux-64
                          https://conda.anaconda.org/conda-forge/noarch
                          https://repo.anaconda.com/pkgs/main/linux-64
                          https://repo.anaconda.com/pkgs/main/noarch
                          https://repo.anaconda.com/pkgs/r/linux-64
                          https://repo.anaconda.com/pkgs/r/noarch
          package cache : /home/bill/anaconda3/pkgs
                          /home/bill/.conda/pkgs
       envs directories : /home/bill/anaconda3/envs
                          /home/bill/.conda/envs
               platform : linux-64
             user-agent : conda/4.12.0 requests/2.27.1 CPython/3.8.13 Linux/5.4.0-121-generic ubuntu/20.04.4 glibc/2.31
                UID:GID : 1000:1000
             netrc file : None
           offline mode : False

I solved with conda update -n base conda -c defaults.

This updated a whole lot of packages. However, when immediately after that I run conda update conda, this changed again a whole lot if packages (replacing again packages from defaults to conda-forge versions), but now, at least, it seems conda is at the newest version.

I have no real clue what's going on... problay it was stuck in some weird states, it go unstucked by forcing updating from defaults, but when updating once more, conda-forge channel was restored as higher priority, but this time not stuck. Possible?

Is there any guideline to manage this situation? If I want packages from conda-forge, should I remove defaults channel altogether?

mzannoni commented 2 years ago

Just for confirmation, I've just tried with a fresh new installation of anaconda (Anaconda3-2022.05-Linux-x86_64.sh), which installs 4.12.

Then, right after installation, I've updated conda (when only defaults channel was there). After that, I'm not able to install anything anymore (let's say, mamba for instance...) if I add conda-forge (stuck at Solving environment). What's wrong with conda-forge? I can't find any news about it online...

EDIT: I've tried both by adding the channel to .condarc, or just after the fresh installation, without any channel added by running conda install mamba -c conda-forge. I think I'm gonna try now with a previous version of anaconda, being careful not to update it.

mzannoni commented 2 years ago

I've added some comments on how I solved this here, which seems to be a related (if not the same?) issue.

Sorry for spamming around... I feel I've been a bit sloppy with all this commenting, but it seems I'm able to have conda working now.

miRastic commented 2 years ago 
conda install conda=22.9.0
conda update -n base conda

Solved the issue

ijpulidos commented 1 year ago

I am still facing this problem when trying to update conda:

❯ conda update -n base conda -c defaults
Collecting package metadata (current_repodata.json): done
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.12.0
  latest version: 23.1.0

Please update conda by running

    $ conda update -n base -c defaults conda

# All requested packages already installed.

I wonder if it's related to having the following packages from conda-forge in the base environment:


mamba                     0.15.3           py39h951de11_0    conda-forge
micromamba                1.1.0                         0    conda-forge
python_abi                3.9                      2_cp39    conda-forge

The workaround suggested in https://github.com/conda/conda/issues/6941#issuecomment-1298053424 doesn't work for me. I just get conflicts that cannot be solved.

MorriAtAltos commented 1 year ago

Having the same issue as well, the workaround does not work in my case as well 

conda update -n base -c defaults conda
Collecting package metadata (current_repodata.json): done
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.12.0
  latest version: 23.3.1

Please update conda by running

    $ conda update -n base -c defaults conda

# All requested packages already installed.
alex-lechner commented 1 year ago

I am having the same issue on macOS 13.3:

❯ conda update -n base -c defaults conda
Collecting package metadata (current_repodata.json): done
Solving environment: done

==> WARNING: A newer version of conda exists. <==
  current version: 4.7.10
  latest version: 23.3.1

Please update conda by running

    $ conda update -n base -c defaults conda

# All requested packages already installed.
roachsinai commented 1 year ago

Add --strict-channel-priority works for me:

conda install -n base defaults::conda --strict-channel-priority

github-actions[bot] commented 2 months ago

Hi there, thank you for your contribution!

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