Augment "Find Similar Neurons" query page with option to use NBLAST scores

connectome-neuprint / neuPrintExplorer

View connectomic data stored in neuPrint

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Augment "Find Similar Neurons" query page with option to use NBLAST scores #328

Closed stuarteberg closed 2 years ago

stuarteberg commented 2 years ago

[ ] Add a field in the neuprint Meta object to specify whether or not NBLAST scores are available in the neo4j database.
[ ] Devise a suitable cypher query for neuprint explorer to construct
[ ] Add an option to the UI for the user to select which algorithm to use (NBLAST vs. synapse distributions)

umayaml commented 2 years ago

Added nBlastMatches boolean to hemibrain_Meta. If true then NblastMatchTo relationship between Neurons exists in dataset.

umayaml commented 2 years ago

Example query to search for nblast matches for a bodyId with a score filter. MATCH(n :hemibrain_Neuron)-[x :NblastMatchTo]->(m :hemibrain_Neuron) WHERE x.score > 0.1 AND n.bodyId=1250920325 RETURN n.bodyId, n.instance, n.type, x.score, m.bodyId, m.instance, m.type ORDER By x.score DESC

neomorphic commented 2 years ago

These updates were added to the @neuprint/queries module.