connor-lab / ncov2019-artic-nf

A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019
GNU Affero General Public License v3.0
88 stars 89 forks source link

Variant definitions #101

Open m-bull opened 3 years ago

m-bull commented 3 years ago

Junk the approach for calling VOC/VUI from VCFs and use aln2type with the proper definitions.