Pin pip version in environment.yml

connor-lab / ncov2019-artic-nf

A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

GNU Affero General Public License v3.0

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Pin pip version in environment.yml #116

Open MattBashton opened 2 years ago

MattBashton commented 2 years ago

Looks like a recent conda forge update has caused install of aln2type with pip to fail within the conda env of the variant_definitions branch:

SyntaxError: future feature annotations is not defined

failed

CondaEnvException: Pip failed

A fix is to force the last version to install in the environment.yml:

- pip=21.3.1

Which should fix the issue.