Compilation error on Azure (Ubuntu 18.04)

[delfair]

Hi, I'm getting the following error trying to run the (--illumina profile) pipeline on an Azure VM instance, running Ubuntu 18.04:

N E X T F L O W  ~  version 19.10.0
Launching `connor-lab/ncov2019-artic-nf` [soggy_gilbert] - revision: c4c617be46 [master]
NOTE: Your local project version looks outdated - a different revision is available in the remote repository [48816ee6e6]
Script compilation error
- file : /home/adminMicroNGS01/.nextflow/assets/connor-lab/ncov2019-artic-nf/main.nf
- cause: Not a valid include definition -- it must specify the module path as a string @ line 7, column 1.
   include {articNcovNanopore} from './workflows/articNcovNanopore.nf'
   ^

Script compilation error
- file : /home/adminMicroNGS01/.nextflow/assets/connor-lab/ncov2019-artic-nf/main.nf
- cause: Not a valid include definition -- it must specify the module path as a string @ line 8, column 1.
   include {ncovIllumina} from './workflows/illuminaNcov.nf'
   ^

Script compilation error
- file : /home/adminMicroNGS01/.nextflow/assets/connor-lab/ncov2019-artic-nf/main.nf
- cause: Not a valid include definition -- it must specify the module path as a string @ line 9, column 1.
   include {ncovIlluminaCram} from './workflows/illuminaNcov.nf'
   ^

3 errors

Same thing if I clone and specify local repo.

Any suggestions to troubleshoot this?

Thanks! D

[m-bull]

Please can you try with the latest version of Nextflow?

Imports changed 19.x -> 20.x

[m-bull]

No update, closing.