updating ivar version to 1.2.3

connor-lab / ncov2019-artic-nf

A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

GNU Affero General Public License v3.0

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updating ivar version to 1.2.3 #66

Closed FredDodd6 closed 4 years ago

m-bull commented 4 years ago

Timely comment (https://github.com/connor-lab/ncov2019-artic-nf/issues/65) indicates that samtools should be bumped to v1.10 to allow conda to solve the environment in the Illumina container.

m-bull commented 4 years ago

Lots of tests fixes in here apologies - thanks for the inital PR @FredDodd6