Open FredDodd6 opened 3 years ago
Thanks for the PR @FredDodd6.
Tests failed because csv produced by qc.py
has to have "qc_pass: TRUE/FALSE" in the final column. The next stage of the nf process uses this column to send samples down different routes.
Should be a simple case of swapping these elements around in the dict.
Adds mean coverage to qc.py. And an extra column in the csv for mean coverage.