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const-ae
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proDA
Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/
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check sigma2 for 0
#22
elena-krismer
closed
10 months ago
0
Sigma is 0 when calculating hess_fnc
#21
elena-krismer
closed
10 months ago
3
constitutively missing peptides/proteins across "runs"
#20
amackey
opened
1 year ago
1
NA dropout_curve parameters
#19
amackey
opened
1 year ago
2
fix position/scale typo; streamline logic
#18
amackey
closed
1 year ago
1
Pre-filtering steps and requirements per sample
#17
joannawolthuis
opened
2 years ago
3
Equivalent of Fold-Change analysis?
#16
joannawolthuis
opened
2 years ago
8
quick question: data with no replication
#15
hukai916
closed
2 years ago
4
different results for some proteins depending test used.
#14
wolski
opened
2 years ago
0
dist_approx() not stable
#13
hukai916
opened
2 years ago
0
Can proDA be used for paired data?
#12
hukai916
closed
2 years ago
1
Why Intensity over iBAQ?
#11
hukai916
opened
2 years ago
2
Modelling repeated measurements in the presence of missing observations.
#10
wolski
closed
2 years ago
10
improve speed of function fit_parameters_loop
#9
tnaake
opened
3 years ago
2
speed up lm_pd.fit
#8
tnaake
closed
3 years ago
15
Creating heatmap of protein expression across conditions with proDA package
#7
arjun0502
closed
3 years ago
1
import_MaxQuant filter
#6
demar01
opened
3 years ago
1
proDA not on CRAN anymore?
#5
jpquast
closed
3 years ago
1
model contrasts
#4
abrozzi
closed
4 years ago
6
Replacing 0's by NA's on log transformed data
#3
phauchamps
closed
4 years ago
7
Added link to preprint to README, 2nd try
#2
simon-anders
closed
5 years ago
1
Added link to preprint to README
#1
simon-anders
closed
5 years ago
1