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constantAmateur / SoupX

R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
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pointSize in plotChangeMap is fixed to 0.5 when dataType == "soupFrac" #105

Closed Close-your-eyes closed 2 years ago

Close-your-eyes commented 2 years ago

The title says it,

SoupX::plotChangeMap(sc, out, geneSet = "GNLY", pointSize = 10, dataType = "counts") # does work (large points) SoupX::plotChangeMap(sc, out, geneSet = "GNLY", pointSize = 10, dataType = "soupFrac") # does not work (point size unaffected)

In the code one can see that 0.5 is hard-coded in the soupFrac-part of the function.

I think this is unintended.

I use the CRAN version.

constantAmateur commented 2 years ago

Thanks. This will be fixed.