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constantAmateur / SoupX

R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
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other assay compatibility #130

Open roosheelpatel opened 1 year ago

roosheelpatel commented 1 year ago

Thanks for developing SoupX.

Had a brief question; is SoupX compatible assess and decontaminate other 10X Genomic assays (i.e. antibody counts or CRISPR library counts assays). Do the baseline assumptions apply to these data for SoupX? Let me know!

Thank you!