constantAmateur / SoupX

R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data
249 stars 34 forks source link

Effect of change prior rho? #88

Closed ms-gx closed 2 years ago

ms-gx commented 2 years ago

For my first question, let me show you some plots of rho:

First rho: A1_24h_rho

Second rho: A1_48h_rho

Third rho: A3_48h_rho

Fourth rho: A4_48h_rho

What is your take on those distributions?

My second question: Would you change the priors for distributions three and four? If yes, why and what difference would it likely make?

ms-gx commented 2 years ago

Close this one. Based on a personal discussion with you I think it would not help the change the prior rho.