Refactor medical imaging datasets for experiments

constantinpape / torch-em

Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.

MIT License

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Closed anwai98 closed 1 week ago

anwai98 commented 1 week ago

Hi @constantinpape,

There's quite a lot of changes in this PR, mostly focused on:

Structuring the (relevant) medical imaging datasets (with docstrings, standard format of functions, etc)
Ensure exclusive train-val-test splits for all datasets.

GTG from my side!