Closed zxclovezby closed 2 years ago
hello， I am using resource_monitor operation reports an error, but the command line operation does not report an error
resource_monitor -Omon -- bcftools norm -m-both -O v -f ucsc.hg19.noconfig.fasta -o Sample20210711-A-A00289.raw.vcf Sample20210711-A-A00289.bias.filtered.vcf.gz result： { "executable_type":"dynamic", "monitor_version":"7.0.8.", "host":"localhost.localdomain", "command":"bcftools norm -m-both -O v -f ucsc.hg19.noconfig.fasta -o Sample20210711-A-A00289.raw.vcf Sample20210711-A-A00289.bias.filtered.vcf.gz", "exit_status":139, "exit_type":"signal", "signal":11, "start": [ 1649988191894268, "us" ], "end": [ 1649988191912640, "us" ], "cores_avg": [ 0.151, "cores" ], "cores": [ 1, "cores" ], "wall_time": [ 0.018372, "s" ], "cpu_time": [ 0.002771, "s" ], "max_concurrent_processes": [ 1, "procs" ], "total_processes": [ 1, "procs" ], "memory": [ 1, "MB" ], "virtual_memory": [ 30, "MB" ], "swap_memory": [ 0, "MB" ], "bytes_read": [ 0.00107193, "MB" ], "bytes_written": [ 0, "MB" ], "bytes_received": [ 0, "MB" ], "bytes_sent": [ 0, "MB" ], "bandwidth": [ 0, "Mbps" ], "total_files": [ 193, "files" ], "disk": [ 3, "MB" ], "machine_cpus": [ 96, "cores" ], "machine_load": [ 7.23, "procs" ], "peak_times": { "units":"s", "machine_load":0.002521, "machine_cpus":0.002521, "cpu_time":0.018372, "cores":0.002521, "max_concurrent_processes":0.002521, "memory":0.002521, "virtual_memory":0.002521, "bytes_read":0.002521, "total_files":0.002521, "disk":0.002521 } but the command line operation does not report an error， Someone has encountered this exit_type？
resource_monitor -Omon -- bcftools norm -m-both -O v -f ucsc.hg19.noconfig.fasta -o Sample20210711-A-A00289.raw.vcf Sample20210711-A-A00289.bias.filtered.vcf.gz
{ "executable_type":"dynamic", "monitor_version":"7.0.8.", "host":"localhost.localdomain", "command":"bcftools norm -m-both -O v -f ucsc.hg19.noconfig.fasta -o Sample20210711-A-A00289.raw.vcf Sample20210711-A-A00289.bias.filtered.vcf.gz", "exit_status":139, "exit_type":"signal", "signal":11, "start": [ 1649988191894268, "us" ], "end": [ 1649988191912640, "us" ], "cores_avg": [ 0.151, "cores" ], "cores": [ 1, "cores" ], "wall_time": [ 0.018372, "s" ], "cpu_time": [ 0.002771, "s" ], "max_concurrent_processes": [ 1, "procs" ], "total_processes": [ 1, "procs" ], "memory": [ 1, "MB" ], "virtual_memory": [ 30, "MB" ], "swap_memory": [ 0, "MB" ], "bytes_read": [ 0.00107193, "MB" ], "bytes_written": [ 0, "MB" ], "bytes_received": [ 0, "MB" ], "bytes_sent": [ 0, "MB" ], "bandwidth": [ 0, "Mbps" ], "total_files": [ 193, "files" ], "disk": [ 3, "MB" ], "machine_cpus": [ 96, "cores" ], "machine_load": [ 7.23, "procs" ], "peak_times": { "units":"s", "machine_load":0.002521, "machine_cpus":0.002521, "cpu_time":0.018372, "cores":0.002521, "max_concurrent_processes":0.002521, "memory":0.002521, "virtual_memory":0.002521, "bytes_read":0.002521, "total_files":0.002521, "disk":0.002521 }
hello， I am using resource_monitor operation reports an error, but the command line operation does not report an error
resource_monitor -Omon -- bcftools norm -m-both -O v -f ucsc.hg19.noconfig.fasta -o Sample20210711-A-A00289.raw.vcf Sample20210711-A-A00289.bias.filtered.vcf.gzresult：{ "executable_type":"dynamic", "monitor_version":"7.0.8.", "host":"localhost.localdomain", "command":"bcftools norm -m-both -O v -f ucsc.hg19.noconfig.fasta -o Sample20210711-A-A00289.raw.vcf Sample20210711-A-A00289.bias.filtered.vcf.gz", "exit_status":139, "exit_type":"signal", "signal":11, "start": [ 1649988191894268, "us" ], "end": [ 1649988191912640, "us" ], "cores_avg": [ 0.151, "cores" ], "cores": [ 1, "cores" ], "wall_time": [ 0.018372, "s" ], "cpu_time": [ 0.002771, "s" ], "max_concurrent_processes": [ 1, "procs" ], "total_processes": [ 1, "procs" ], "memory": [ 1, "MB" ], "virtual_memory": [ 30, "MB" ], "swap_memory": [ 0, "MB" ], "bytes_read": [ 0.00107193, "MB" ], "bytes_written": [ 0, "MB" ], "bytes_received": [ 0, "MB" ], "bytes_sent": [ 0, "MB" ], "bandwidth": [ 0, "Mbps" ], "total_files": [ 193, "files" ], "disk": [ 3, "MB" ], "machine_cpus": [ 96, "cores" ], "machine_load": [ 7.23, "procs" ], "peak_times": { "units":"s", "machine_load":0.002521, "machine_cpus":0.002521, "cpu_time":0.018372, "cores":0.002521, "max_concurrent_processes":0.002521, "memory":0.002521, "virtual_memory":0.002521, "bytes_read":0.002521, "total_files":0.002521, "disk":0.002521 }but the command line operation does not report an error， Someone has encountered this exit_type？