Hello,
I believe it would be very useful to add the command line used invoke savana with the parameters values, in the vcf file metadata.
For example cuteSV and bcftools add something like:
Thanks very much for your suggestion. I've implemented this in commit fdbab9c as a savana_args= field in the header which lists the command line arguments. This change will be included in the next release of SAVANA which should also address issue #17
Hello, I believe it would be very useful to add the command line used invoke savana with the parameters values, in the vcf file metadata. For example cuteSV and bcftools add something like:
This would help when reconstructing the history of a vcf file. BR Walter