Dataset of true somatic SVs used for savana training

cortes-ciriano-lab / savana

Somatic structural variant caller for long-read data

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Dataset of true somatic SVs used for savana training #31

Closed waltergallegog closed 4 weeks ago

waltergallegog commented 12 months ago

Hello, If possible, could you share the dataset that has been used for the training of the somatic classifier, or add some information about the dataset on the README. Thanks and BR Walter.

helrick commented 4 weeks ago

Hi there,

Please find information on the dataset used for training the classifier in SAVANA in our recent preprint. Let me know if I can provide any additional information.

All the best, Hillary