cortex-lab / KiloSort

GPU code for spike sorting
GNU General Public License v2.0
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Getting variance captured by each principal component #201

Open markagrios opened 5 years ago

markagrios commented 5 years ago

Hi!

I'm trying to use the output from kilosort2 to generate some graphs for a grant and I want to plot the cumulative variance captured versus principle component number. I understand that each principal component explains some percentage of the data but I don't know where that information is stored or how I can generate it from the kilosort2 output. Any help would be appreciated, thanks!!