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cortex-lab / KiloSort

GPU code for spike sorting
GNU General Public License v2.0
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TemplateGuI kilosort waveform view issue #219

Open jnamgoon opened 4 years ago

jnamgoon commented 4 years ago

Hello, I am pretty new to Kilosort. I noticed that during manual spike sorting, when a single cluster is selected. some channels would appear empty on the waveform view, even when that channel was listed as showing highest activity. However, when the cluster is selected together with another cluster that shows highest activity on a channel of a different shank, the channel that was initially empty starts showing waves. I know that was phrased very badly so here is an example: This is a waveformview of a single cluster with highest activity supposedly at channel 51 channel 51

This is when the same cluster (right) is selected with another cluster (left) with supposed activity detected on the channel on a different shank of the electrode: channel 51 with 42

Thank you

rossant commented 4 years ago

Have you installed the latest versions of phy and phylib?

jnamgoon commented 4 years ago

I believe so.

rossant commented 4 years ago

The screenshots are from a slightly earlier version, you might need to reinstall phy and phylib. This particular bug was fixed

jnamgoon commented 4 years ago

We checked and reinstalled phy! I think the problem is fixed! Thank you so much!