First of all thank you very much for this amazing software.
I am performing dual recordings with two 64 channel probes cambridge neurotech E1 (4 shanks and H3 (1 shank) in two different regions (cortex and thalamus), in total 128 channels recordings. So far I was running kilosort for each region independently using 2 independent .bin files. Recently i was told that is possible to run kilosort over a 128 channel bin file and create a common channel map for both probes at the same time, however i am struggling to figure out how to do this. Should i use "Kcoords" = 1 for the channels that belong to the first probe, and kcoords =2 for the channels that belong to the second probe?
Hello
First of all thank you very much for this amazing software.
I am performing dual recordings with two 64 channel probes cambridge neurotech E1 (4 shanks and H3 (1 shank) in two different regions (cortex and thalamus), in total 128 channels recordings. So far I was running kilosort for each region independently using 2 independent .bin files. Recently i was told that is possible to run kilosort over a 128 channel bin file and create a common channel map for both probes at the same time, however i am struggling to figure out how to do this. Should i use "Kcoords" = 1 for the channels that belong to the first probe, and kcoords =2 for the channels that belong to the second probe?
Could you please help me out?
Many thanks in advance
Jesus