I have run into this error when using either KS3 or KS2.5. The only difference is that with 2.5 the programme continues whereas KS3 stops. Given than KS2.5 continues until end, and produces all results as expected such as spike times, cluster ids, etc and I can use Phy. The questions I have are this:
Is this error effecting the results in anyway?
Do you have any solutions to try to fix it so I can use KS3 assuming the error is a debug figure and not effecting results
I'm running:
Windows 10
Matlab 2022
Time 0s. Computing whitening matrix..
Getting channel whitening matrix...
Channel-whitening matrix computed.
Time 3s. Loading raw data and applying filters...
Time 85s. Finished preprocessing 470 batches.
pitch is 15 um
0.20 sec, 1 batches, 2199 spikes
15.38 sec, 101 batches, 226296 spikes
30.50 sec, 201 batches, 434168 spikes
45.49 sec, 301 batches, 671250 spikes
60.40 sec, 401 batches, 905111 spikes
70.72 sec, 470 batches, 1057989 spikes
time 122.08, Shifted up/down 470 batches.
Time 125s. Optimizing templates ...
125.09 sec, 1 / 470 batches, 46 units, nspks: 5.2593, mu: 17.3838, nst0: 66, merges: 0.0000, 0.0000, 2.2000
138.96 sec, 101 / 470 batches, 135 units, nspks: 1427.4727, mu: 14.0652, nst0: 1703, merges: 122.8181, 0.1498, 27.3448
152.72 sec, 201 / 470 batches, 137 units, nspks: 1529.9989, mu: 13.9270, nst0: 1336, merges: 138.0582, 0.0182, 27.5406
166.33 sec, 301 / 470 batches, 131 units, nspks: 1580.7575, mu: 13.9144, nst0: 1381, merges: 135.0577, 0.0172, 26.9420
Warning: Error making figure was: Argument must be a Figure object or a positive integer.
> In learnTemplates (line 260)
In learnAndSolve8b (line 35)
In ksGUI/runSpikesort (line 786)
In ksGUI/runAll (line 628)
In ksGUI>@(~,~)obj.runAll() (line 319)
179.67 sec, 401 / 470 batches, 131 units, nspks: 1498.6388, mu: 13.2335, nst0: 1398, merges: 125.4773, 0.0021, 24.8996
Warning: Error making figure was: Argument must be a Figure object or a positive integer.
> In learnTemplates (line 260)
In learnAndSolve8b (line 35)
In ksGUI/runSpikesort (line 786)
In ksGUI/runAll (line 628)
In ksGUI>@(~,~)obj.runAll() (line 319)
Elapsed time is 188.776199 seconds.
Finished learning templates
Time 189s. Optimizing templates ...
189.04 sec, 1 / 470 batches, 112 units, nspks: 1581.0000, mu: 14.5205, nst0: 3722
198.33 sec, 101 / 470 batches, 112 units, nspks: 156089.0000, mu: 14.5205, nst0: 3211
207.41 sec, 201 / 470 batches, 112 units, nspks: 304853.0000, mu: 14.5205, nst0: 2983
217.02 sec, 301 / 470 batches, 112 units, nspks: 474782.0000, mu: 14.5205, nst0: 4638
226.53 sec, 401 / 470 batches, 112 units, nspks: 639775.0000, mu: 14.5205, nst0: 3036
Elapsed time is 232.992521 seconds.
Number of spikes before applying cutoff: 1657763
initialized spike counts
Found 0 splits, checked 1/112 clusters, nccg 0
Found 31 splits, checked 101/143 clusters, nccg 9
Finished splitting. Found 33 splits, checked 145/145 clusters, nccg 16
Removing 820228 spikes below cutoff from rez.
Hi there,
I have run into this error when using either KS3 or KS2.5. The only difference is that with 2.5 the programme continues whereas KS3 stops. Given than KS2.5 continues until end, and produces all results as expected such as spike times, cluster ids, etc and I can use Phy. The questions I have are this:
I'm running: