cortex-lab / KiloSort

GPU code for spike sorting
GNU General Public License v2.0
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Running Kilosort3 on a CPU -- is it possible? #270

Open cgallimore25 opened 1 month ago

cgallimore25 commented 1 month ago

I found I can circumvent some of the initial gpuArray errors by setting ks.ops.GPU= 0; which allows me to at least view my data (preprocessed beforehand via highpass filtering and common average referencing prior to writing to a .bin file). Some pre-processing steps inside of kilosort (e.g. whitening filter) seem dependent on GPU operations.

Must i look towards Kilosort4 in python, else get a GPU?