standalone spike detection

cortex-lab / Suite2P

Tools for processing 2P recordings

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standalone spike detection #95

Closed geffenlab closed 6 years ago

geffenlab commented 6 years ago

Hi Marius, A couple of questions about the stand alone spike deconvolution:

what's the difference between deconvolution_standalone and deconvolution_standalone2 ?
these two functions don't seem to use the new OASIS thing - is that correct? I want to reanalyse some old data with the new spike deconvolution.... Thanks! Kath

marius10p commented 6 years ago

Sorry for the delay in responding. Those are no longer the top level functions for spike deconvolution. Instead, check out wrapperDECONV(ops, F, N). You can specify oasis with ops.deconvType = 'OASIS', or you can use the L0 deconvolution with ops.deconvType = 'L0'.

geffenlab commented 6 years ago

thanks