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cortex-lab / phy

phy: interactive visualization and manual spike sorting of large-scale ephys data
BSD 3-Clause "New" or "Revised" License
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Issue loading and visualizing previously curated data #1258

Open fieldsch98 opened 3 months ago

fieldsch98 commented 3 months ago

I'm having an issue visualizing previously curated data in Phy2 after it has been moved to a server for backup. My intention is to review the manual curation of a previously curated recording (sorted using kilosort 2.5), but after copying the experiment folder from the server to my local drive (and changing the temp_wh.dat path in params.py), I'm unable to reload the manually assigned labels and the waveforms of almost all (but not all) of the 'neurons' look like electrical noise. The cluster_group.tsv file still has all the information regarding manual assignment, and I believe that all the phy2 output files are in the folder in the appropriate place. I am still able to reload and visualize manual curation for experiment folders that I haven't yet moved, but not ones that have been backed up to our experimental data server.

I've included a screenshot of what a lot of the noise looks like Phy2_issue

zm711 commented 3 months ago

So the error is just that it is not displaying the info from the .tsv? I'm just trying to make sure I understand the problem.