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cosanlab / nltools

Python toolbox for analyzing imaging data
https://nltools.org
MIT License
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cannot import name '_get_dataset_dir' from 'nilearn.datasets.utils' (/opt/conda/lib/python3.11/site-packages/nilearn/datasets/utils.py) #444

Open stebo85 opened 1 month ago

stebo85 commented 1 month ago

Dear nltools team,

It seems nltools 0.5.1 is currently not working with nilearn 0.10.4 under Python 3.11.6. The error I get when running:

from nltools import *

is 

---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)
Cell In[30], line 1
----> 1 from nltools import *

File /opt/conda/lib/python3.11/site-packages/nltools/datasets.py:25
     23 import pandas as pd
     24 from nltools.data import Brain_Data
---> 25 from nilearn.datasets.utils import _get_dataset_dir, _fetch_file
     26 from pynv import Client
     28 # Optional dependencies

ImportError: cannot import name '_get_dataset_dir' from 'nilearn.datasets.utils' (/opt/conda/lib/python3.11/site-packages/nilearn/datasets/utils.py)
stebo85 commented 1 month ago

If anyone else runs into this problem, before this toolbox is fixed, this is a combination of older dependency versions that works with Python 3.11.6:

pip install nltools==0.4.7 nilearn==0.10.2 scipy==1.11.4