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courtiol / IsoriX

This is the gthub repository dedicated to the development of the R package IsoriX
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Error in isoscape function? #112

Closed LaraSp closed 5 years ago

LaraSp commented 5 years ago

Hi!

When I'm trying to run EuropeScape <- isoscape(raster = ElevRaster, isofit = EuropeFit) I got this error and warning message:

Error: $ operator is invalid for atomic vectors In addition: Warning message: In isoscape(raster = ElevRaster, isofit = EuropeFit) : The isofit has been fitted on a different version of spaMM than the one called by IsoriX. This may create troubles in paradize... Timing stopped at: 0.49 0.04 0.9"

It worked perfectly last week. I've updated spaMM package and Isorix as well and I still got the same message. Any ideas how i can fix it?

Many thanks

f-rousset commented 5 years ago

Hi,

The isofit has been fitted on a different version of spaMM and I've updated spaMM package... and I still got the same message may mean exactly what the message means: "isofit has been fitted on a different version of spaMM" and updating spaMM does not mean that the isofit has been refitted with the new spaMM version.

You can check the version of spaMM which produced EuropeFit by spaMM::how(EuropeFit$mean_fit).

Best,

F.

courtiol commented 5 years ago

Dear @LaraSp, I think that you must have saved your fitted model somewhere, in a EuropeFit.rda object perhaps. That object seems to have been created before you updated spaMM. So what you should simply do is to refit the model and save it again if needed. Does that solve the issue? Best, Alex