Binder error

[zelenkastiot]

I think that there is an error in the JupyterLab MyBinder session since we moved the files out of the root:

Possible solutions I can think of are:

• have all the files in the root in a new branch, which would be edited here:

https://github.com/courtois-neuromod/anat-processing-book/blob/b2b2046823ec75a17c697252e27adf4154d3d558/_config.yml#L33

• have them in the root of main like they were

[jcohenadad]

ooops! 😬 Sorry.

Is that something that you can change on your Binder config? For example, when I compile locally with the sources moved, I just point to the source folder:

jupyter-book build source/

Also, what do you use Binder for?

I changed it because I found it cleaner to enclose the source of the book at one location (ie: separate from the jupyter book config files). Other projects seem to also do it:

• https://github.com/executablebooks/quantecon-example
• https://github.com/YannDubs/Neural-Process-Family
• https://github.com/INRIA/scikit-learn-mooc

[zelenkastiot]

No worries, we use Binder for reproducing the plots from the notebooks. We don't have to use it, we can use Google Colab instead. I have both linked 😄

[zelenkastiot]

I fixed the error when running the notebook on Binder. I added the path of the book inside the config!

https://github.com/courtois-neuromod/anat-processing-book/blob/150eea141e7cb34d07059b6e6c10332127770dae/source/_config.yml#L49

I will close this issue.