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courtois-neuromod / cneuromod

Courtois NeuroMod collection of raw datasets
https://cneuromod.ca
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derivatives available? #15

Closed jsmentch closed 1 year ago

jsmentch commented 2 years ago

In the docs it says that there are fMRIprep derivatives, but these aren't listed in the readme and I don't see them within the repo. Are these available somewhere or will they be available in the future?

arnaudbore commented 2 years ago

Hi @jsmentch, They will definitively be available in the near future. Still some work to be done first.

pbellec commented 2 years ago

We (fairly) recently reorganized the way we generate derivatives, and the docs are not up-to-date. I think this is where derivatives currently live, and should be ready to go for the 2020 release https://github.com/courtois-neuromod/cneuromod.fmriprep/tree/rel/2020

Unfortunately, the person who can confirm is currently on vacation, we'll confirm as soon as he's back. Sorry for the inconvenience.

jsmentch commented 2 years ago

Yes these do appear to be the derivatives - I am able to get them from s3 via datalad from there for now - thank you!

bpinsard commented 1 year ago

Hi, just back from vacations. https://github.com/courtois-neuromod/cneuromod.processed is a super-dataset that contains all the derivatives of cneuromod.