errors in FoV of few fieldmaps for functional datasets

courtois-neuromod / cneuromod

Courtois NeuroMod collection of raw datasets

https://cneuromod.ca

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errors in FoV of few fieldmaps for functional datasets #5

Closed bpinsard closed 4 years ago

bpinsard commented 4 years ago

Some instance (1 spotted for now) of AP functional scans have a FoV that does not match the bold scan. Adjustment in the sidecars are required.

bpinsard commented 4 years ago

IntendedFor are set only if there is a phase-reversed scan with matching ShimSettings or ImageOrientationPatient. Otherwise, if FoV diff is minimal we manually set IntendedFor to use phase-reversed scan. If not, no IntendedFor is set for that bold and syn is used by fmriprep/sdcflows.