Update to ensure that more lower quality samples that could be classified as sublineages BA. get a "Probable Omicron (BA.-like)" call instead of a parent call. Make the parent "Omicron (Unclassified)" and remove mrca_lineage field from it so that pangolin does not call lineage B.1.1.529 (there are no designated sequences)
Update to ensure that more lower quality samples that could be classified as sublineages BA. get a "Probable Omicron (BA.-like)" call instead of a parent call. Make the parent "Omicron (Unclassified)" and remove mrca_lineage field from it so that pangolin does not call lineage B.1.1.529 (there are no designated sequences)