Closed AKWB closed 1 year ago
Yes, same issue - I'm working on a fix
would it be possible to provide a simple tsv-file (as in early days) with the same data normally displayed on the webpage? This would at least allow us to continue annotation of lineages in our reporting.
The information that is loaded into that table is available in JSON format here https://github.com/cov-lineages/lineages-website/blob/master/_data/lineage_data.json (or if that file is too large for you, the same info is currently spread equally into 5 files with the names https://github.com/cov-lineages/lineages-website/blob/master/_data/lineage_data_X.json). Feel free to parse them instead
For those who might need it as well:
import pandas as pd
pdObj = pd.read_json('lineage_data.json', orient='index') pdObj.to_csv('lineageData.csv', columns=["Lineage","Countries","Earliest date","Number designated","Number Assigned","Description"], index=False)
OK, this page is now live again although it has now been filtered to only those lineages which have been seen globally in the last year.
Note for future me:
do you have somewhere still the BIG json file? As we are reprocessing all our samples with anew pangolin update, including all lineages...I think I saw somewhere a file > 100MB (?)
We could theoretically push the large file to git-lfs and provide a link to the website, even if it won't be able to be rendered on the website
The original file has been pushed back to the LFS https://github.com/cov-lineages/lineages-website/blob/master/_data/lineage_data.full.json
Hi there,
is this issue connected to one of the others, listed here? I do not see any lineages listed.
Greets