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cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
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XBB.1.5.17 with orf9b:P10F (1059 seqs, 18 countries) #2084

Closed aviczhl2 closed 9 months ago

aviczhl2 commented 1 year ago

From https://github.com/sars-cov-2-variants/lineage-proposals/issues/319

XBB.1.5.17+orf9b:P10F(C28312T)

I think this worth designation, as it is quite large with ~1000 seqs, and has a meaningful orf9b mutation. There're also some interesting Spike mutations inside its tree.

GISAID query: C28312T,C23635T,T10204C

No. of seqs: 909(Australia, Austria, Canada, Chile, Costa Rica, UK, Finland, India, Mexico, Netherlands, New Zealand, Poland, Singapore, South Korea, China, Thailand, USA, Japan)

First: EPI_ISL_16572816, 2022-12-26, USA Latest: EPI_ISL_17859895, 2023-6-20, USA

Most of the seqs also have Orf7b:F13L.

usher image

aviczhl2 commented 11 months ago

There is a Flip seq inside this branch uploaded today. EPI_ISL_18399731

FedeGueli commented 9 months ago

There is a Flip seq inside this branch uploaded today. EPI_ISL_18399731

still singlet thx for closing.