Closed FedeGueli closed 11 months ago
Original proposal here: https://github.com/sars-cov-2-variants/lineage-proposals/issues/173
Here i want to propose two XBB.1.22.2 lineages, the parental one and its sublineage:
Parental: XBB.1.22.2 >> C15237T, A27507C > A12316G > C2881T, S:K529N (G23149T) Gisaid query: C2881T, G23149T, T28297C Samples:56 EPI_ISL_17202879, EPI_ISL_17300089, EPI_ISL_17383862, EPI_ISL_17386493, EPI_ISL_17471157, EPI_ISL_17492010, EPI_ISL_17566093, EPI_ISL_17590971, EPI_ISL_17597972-17597974, EPI_ISL_17626296, EPI_ISL_17640558, EPI_ISL_17642518-17642519, EPI_ISL_17661530, EPI_ISL_17666857, EPI_ISL_17667355, EPI_ISL_17667605, EPI_ISL_17671322, EPI_ISL_17671345, EPI_ISL_17694124, EPI_ISL_17715779, EPI_ISL_17720143, EPI_ISL_17720160, EPI_ISL_17720167-17720171, EPI_ISL_17732128, EPI_ISL_17737571
Sublineage of Interest: Defining mutations: XBB.1.22.2 >> C15237T, A27507C > A12316G > C2881T, S:K529N (G23149T) >17910G, S:Y28H (T21644C), S:E471Q (G22973C) Query: G23149T, T28297C,A17910G, G22973C Samples: 21 EPI_ISL_17671345, EPI_ISL_17853679, EPI_ISL_17856736, EPI_ISL_17856751, EPI_ISL_17961067, EPI_ISL_17965272, EPI_ISL_17976701, EPI_ISL_17976713, EPI_ISL_17979107, EPI_ISL_17994124, EPI_ISL_17994129, EPI_ISL_17998415, EPI_ISL_18005317, EPI_ISL_18005348, EPI_ISL_18008819, EPI_ISL_18008986, EPI_ISL_18009028, EPI_ISL_18009087, EPI_ISL_18009246, EPI_ISL_18012786, EPI_ISL_18012805
Tree: XBB.1.22.2 Parental lineage Sublineage of interest
https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_2ff8b_f80b50.json?c=gt-S_529,28,471&label=id:node_6762715
Countries: 8
@corneliusroemer i suggest to designate also HU.1 plus S:E471Q it is now 25 and growing.
E471Q now Designated HU.1.1
Original proposal here: https://github.com/sars-cov-2-variants/lineage-proposals/issues/173
Here i want to propose two XBB.1.22.2 lineages, the parental one and its sublineage:
Parental: XBB.1.22.2 >> C15237T, A27507C > A12316G > C2881T, S:K529N (G23149T) Gisaid query: C2881T, G23149T, T28297C Samples:56 EPI_ISL_17202879, EPI_ISL_17300089, EPI_ISL_17383862, EPI_ISL_17386493, EPI_ISL_17471157, EPI_ISL_17492010, EPI_ISL_17566093, EPI_ISL_17590971, EPI_ISL_17597972-17597974, EPI_ISL_17626296, EPI_ISL_17640558, EPI_ISL_17642518-17642519, EPI_ISL_17661530, EPI_ISL_17666857, EPI_ISL_17667355, EPI_ISL_17667605, EPI_ISL_17671322, EPI_ISL_17671345, EPI_ISL_17694124, EPI_ISL_17715779, EPI_ISL_17720143, EPI_ISL_17720160, EPI_ISL_17720167-17720171, EPI_ISL_17732128, EPI_ISL_17737571
Sublineage of Interest: Defining mutations: XBB.1.22.2 >> C15237T, A27507C > A12316G > C2881T, S:K529N (G23149T) >17910G, S:Y28H (T21644C), S:E471Q (G22973C) Query: G23149T, T28297C,A17910G, G22973C Samples: 21 EPI_ISL_17671345, EPI_ISL_17853679, EPI_ISL_17856736, EPI_ISL_17856751, EPI_ISL_17961067, EPI_ISL_17965272, EPI_ISL_17976701, EPI_ISL_17976713, EPI_ISL_17979107, EPI_ISL_17994124, EPI_ISL_17994129, EPI_ISL_17998415, EPI_ISL_18005317, EPI_ISL_18005348, EPI_ISL_18008819, EPI_ISL_18008986, EPI_ISL_18009028, EPI_ISL_18009087, EPI_ISL_18009246, EPI_ISL_18012786, EPI_ISL_18012805
Tree: XBB.1.22.2
Parental lineage
Sublineage of interest
![Schermata 2023-07-25 alle 10 06 35](https://github.com/cov-lineages/pango-designation/assets/87669813/079afff3-f7a3-4594-9993-ac5961636603)
https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_2ff8b_f80b50.json?c=gt-S_529,28,471&label=id:node_6762715
Countries: 8![Schermata 2023-07-25 alle 10 07 35](https://github.com/cov-lineages/pango-designation/assets/87669813/1b46e92b-0f9a-4dda-a03c-2224193cf573)