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cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
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XBB.1.5.59+orf1a:T1429I, S:V510I emerging in New Zealand (54 seqs, 5 countries) #2152

Closed xz-keg closed 1 year ago

xz-keg commented 1 year ago

from https://github.com/sars-cov-2-variants/lineage-proposals/issues/304

XBB.1.5.59+C4551T,G23090A(orf1a:T1429I, S:V510I)

GISAID query: C4551T,G23090A,T8729C,T22928C,T23018C No of seqs: 46( Japan 3 Singapore 2 New Zealand 11 China 30)

First seq: EPI_ISL_17637707, Japan, 2023-4-13 Latest: EPI_ISL_18047831, New Zealand, 2023-7-17

It is in 10/211 of New Zealand's July seqs, propose it for its sudden emergence in NZ.

usher There's seems to be 1 Australian seq of this lineage recombines with something else and lost S:V510I. EPI_ISL_17802191

image

xz-keg commented 1 year ago

49, Australia

xz-keg commented 1 year ago

Seem dead.