NEW GE.1 (478-521) sublineage with S:K529N and S:V705I Us, England (5) - Githubissues

cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme

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NEW GE.1 (478-521) sublineage with S:K529N and S:V705I Us, England (5) #2198

Closed FedeGueli closed 1 year ago

FedeGueli commented 1 year ago

I spotted a recent GE.1 sublineage with a double spike mutation . Tree: Schermata 2023-08-18 alle 17 53 08 https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_42778_f93710.json?c=gt-S_529,705&label=id:node_7345309

Defining mutations: GE.1 >> >Orf1b:I1403V (A17674G) > C25521T > Orf1a:C667S (T2264A) > C21952T, S:K529N (G23149T), S:V705I (G23675A)

Gisaid: C21952T, G23149T,G23675A

Samples: First: hCoV-19/USA/FL-CDC-LC1046208/2023 | Original | EPI_ISL_18037685 | 2023-07-14 Last: hCoV-19/USA/VA-DCLS-15221/2023 | Original | EPI_ISL_18110180 | 2023-07-25

Country : US 4 , Uk 1

FedeGueli commented 1 year ago

wrongly posted here and not on the other repo. i will transfer later