Closed NkRMnZr closed 12 months ago
Transferred from sars-cov-2-variants/lineage-proposals#633
Defining Mutations: HS.1 > T10084A > C6628T > C10252T, T22928C(S:F456L) > G28077T(ORF8:V62L) Query: C6628T, T10084A, T22928C Earliest seq: 2023-05-30 (EPI_ISL_17985957, Puerto Rico) Latest seq: 2023-08-17 (EPI_ISL_18164469, Texas) Sampled Countries: USA(14: Texas/14; Mississippi/6; New York/2; Puerto Rico/2; Delaware/1)
HS.1
T10084A
C6628T
C10252T, T22928C(S:F456L)
G28077T(ORF8:V62L)
C6628T, T10084A, T22928C
EPI_ISL_17985957
EPI_ISL_18164469
UShER: https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_5140_1a6330.json?c=gt-S_478%2C456&gmax=25384&gmin=21563&label=id%3Anode_7279618
view from XBB.1.5.95 polytomy
details
Doubling (submission date) around 15 days.
Transferred from sars-cov-2-variants/lineage-proposals#633
Defining Mutations:
HS.1
>T10084A
>C6628T
>C10252T, T22928C(S:F456L)
>G28077T(ORF8:V62L)
Query:C6628T, T10084A, T22928C
Earliest seq: 2023-05-30 (EPI_ISL_17985957
, Puerto Rico) Latest seq: 2023-08-17 (EPI_ISL_18164469
, Texas) Sampled Countries: USA(14: Texas/14; Mississippi/6; New York/2; Puerto Rico/2; Delaware/1)Genomes:
`EPI_ISL_17856278, EPI_ISL_17985957, EPI_ISL_18057331, EPI_ISL_18057336, EPI_ISL_18057506, EPI_ISL_18059619, EPI_ISL_18099024, EPI_ISL_18099037, EPI_ISL_18104808, EPI_ISL_18104885, EPI_ISL_18107764, EPI_ISL_18110481, EPI_ISL_18110498, EPI_ISL_18110544, EPI_ISL_18119552, EPI_ISL_18119627, EPI_ISL_18119742, EPI_ISL_18126335, EPI_ISL_18137238, EPI_ISL_18160078, EPI_ISL_18162754, EPI_ISL_18163770, EPI_ISL_18163829, EPI_ISL_18164356, EPI_ISL_18164469`UShER: https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/subtreeAuspice1_genome_5140_1a6330.json?c=gt-S_478%2C456&gmax=25384&gmin=21563&label=id%3Anode_7279618
view from XBB.1.5.95 polytomy![poly](https://github.com/cov-lineages/pango-designation/assets/125747944/923504a5-b534-4199-8f49-adbdfae0941a)
details![details](https://github.com/cov-lineages/pango-designation/assets/125747944/305c6a79-34bd-443c-bb5c-42ce119908ce)