HK.3.2 sublineage with S:E471Q(40 sequences, 13 countries)

[Over-There-Is]

from sars-cov-2-variants/lineage-proposals#955

HK.3.2> C10039T> C7765T, T21333C, G22973C(S:E471Q), C25782T

Query: T21333, G22973C(2 dropped out) Query from dropped out sequences: G13627A, T21333, C25782T, -G22973C

Earliest Sequence: 10-12 Singapore (from Hong Kong SAR, China) EPI_ISL_18428701 Latest Sequence: 01-12 Saitama City, Saitama, Japan EPI_ISL_18815223 Regions Detected: China 12(Henan 3, Hong Kong 1, Hubei 1, Liaoning 1, Sichuan 1, Xinjiang 5), Singapore 10(2 from Malaysia, 1 from HK, 1 from Japan, 6 Local), Japan 4(Fukuoka 1, Hokkaido 1, Saitama 1, Tokyo 1), Malaysia 1(Perek); France 2(GES 1, PAC 1), Italy 1(Trentino-Alto Adige), Germany 1(Schleswig-Holstein), Greece 1(Attica); US 3(California[1 from South Korea]); Australia 3(NSW); Mauritius 1(Plaines Wilhems), South Africa** 1(North West)

https://nextstrain.org/fetch/github.com/Over-There-Is/subtreeAuspice/raw/main/subtreeAuspice_genome_20684_763510.json?label=id:node_11040561

Sequences:

EPI_ISL_18428560, EPI_ISL_18428643, EPI_ISL_18428701, EPI_ISL_18438381, EPI_ISL_18505844, EPI_ISL_18513737, EPI_ISL_18513858, EPI_ISL_18530961, EPI_ISL_18535426, EPI_ISL_18551068, EPI_ISL_18605199, EPI_ISL_18609408, EPI_ISL_18611425, EPI_ISL_18618118, EPI_ISL_18625059, EPI_ISL_18651128, EPI_ISL_18669216, EPI_ISL_18672194, EPI_ISL_18672196, EPI_ISL_18677021, EPI_ISL_18700389, EPI_ISL_18701020-18701021, EPI_ISL_18701030, EPI_ISL_18701034, EPI_ISL_18705758, EPI_ISL_18725375, EPI_ISL_18731531, EPI_ISL_18797850, EPI_ISL_18799066, EPI_ISL_18815095, EPI_ISL_18815223, EPI_ISL_18819507, EPI_ISL_18855102, EPI_ISL_18858702, EPI_ISL_18858804, EPI_ISL_18858824, EPI_ISL_18858833, EPI_ISL_18863038

[FedeGueli]

It seems fast, maybe just Singapore effect. maybe not tough

[DailyCovidCases]

Please close this issue