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cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
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BA.2.86.1/(anything with Orf9b:I5T) recombinant(53 seqs, 12 countries) #2474

Closed aviczhl2 closed 3 months ago

aviczhl2 commented 6 months ago

From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1164

BA.2.86.1+T11914C,T28297C, A28958C(rev)

Orf9b:I5T N:K229Q(rev)

T11914C from a BA.2.86.1 branch T28297C, A28958C(rev) from an anything with Orf9b:I5T (May not restricted to XBB* as there is also chance for XCT,XDH etc)

BA.2.86.1--anything with Orf9b:I5T Breakpoint between 27916(likely) and 28296

GISAID query: T28297,T11614,-27915,-28958 No. of seqs: 28(Austria 6 Czech Republic 1 Denmark 1 Finland 2 Germany 3 Ireland 1 Italy 3 Netherlands 2 Spain 1 Switzerland 2 USA 6)

First: EPI_ISL_18530899, Germany, 2023-11-9 Latest: EPI_ISL_18821649, Italy,2024-1-17

The green one is proposed recomb. yellow one with Orf8:G8* are other recombs. usher image

aviczhl2 commented 5 months ago

+1 Iceland

FedeGueli commented 4 months ago

It seems to have slowed down

aviczhl2 commented 4 months ago

+8 Germany

aviczhl2 commented 3 months ago

No new seqs