cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
Other
1.04k stars 97 forks source link

JN.1.1+S:V1264L(92 seqs, 15 countries) #2476

Closed xz-keg closed 7 months ago

xz-keg commented 8 months ago

From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1259

JN.1.1+C9142T+G25352T(S:V1264L)

GISAID query: C9142T,G25352T,C11747T,-3259,-20480 No. of seqs: 76(Australia 1 Greece 1 Canada 2 UK 2 Finland 1 France 53 Ireland 1 Luxembourg 1 Peru 2 Portugal 1 Singapore 1 USA 4 Netherlands 1 Spain 5)

First:EPI_ISL_18537957, France, 2023-10-26 Latest: EPI_ISL_18800467, France, 2024-1-8

There is an 2023-1-2 seq but that's likely date error.

usher 66 on main branch, some are on branches with artefact reversions,shall belong to main branch. Two separately gained V1264L branches are excluded in query. image