JN.1+S:R346T on C2395T branch (35 seqs, 4 countries)

cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme

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JN.1+S:R346T on C2395T branch (35 seqs, 4 countries) #2600

Closed DailyCovidCases closed 2 months ago

DailyCovidCases commented 4 months ago

From branch 10 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1089 JN.1 >G17562T > C2395T > S:R346T (G22599C) Query: C2395T, G22599C,C18894T,-C1762A,-C774T,- Samples : 35 (Ireland 1 Qatar 2 UK 28 USA 4) First: OY989755.1, 2023-12-14 Latest: CLIMB-CM7YRJGO, 2024-04-26 usher Screenshot (51)

DailyCovidCases commented 1 week ago

Tree now: usher Screenshot (219) @corneliusroemer Is this branch worth a designation?

FedeGueli commented 1 week ago

Tree now: usher @corneliusroemer Is this branch worth a designation?

I didnt check but looking at the tree it is not monophyletic and the biggest branch (proposed here) seems dead