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cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
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JN.1+S:F456L with Orf10:P10S (108 seqs) #2613

Open DailyCovidCases opened 1 month ago

DailyCovidCases commented 1 month ago

From branch 36 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253 JN.1+Orf10:P10S+S:F456L Query: T22928C,C26753T,C18894T No. of seqs: 50 (Australia 1 Brazil 34 Netherlands 3 USA 11 France 1) First: EPI_ISL_18971329, 2024-1-12 Latest: EPI_ISL_19144571, 2024-5-7 usher Screenshot (86)

FedeGueli commented 2 weeks ago

94 ping @corneliusroemer this is a global lineage with GBW samples coming from multiple continents.

@DailyCovidCases please update the query with T22928C,C26753T,C18894T,-G24872T, T22928C,C26753T,C18894T,-G24872T,-A532G

excluding some unrelated samples the old query catches. Tree now:

Screenshot 2024-06-17 alle 10 32 28

https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_2ce7_ff3430.json?c=country&label=id:node_6985157

DailyCovidCases commented 1 week ago

108 now

FedeGueli commented 1 week ago

108 now

please update the title too, thx