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cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
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KP.2+Orf1a:V28I+S:S31del with C832T branch (65 seqs, 8 countries) #2720

Closed DailyCovidCases closed 2 months ago

DailyCovidCases commented 2 months ago

Transferred from https://github.com/sars-cov-2-variants/lineage-proposals/issues/1814 KP.2+C832T+Orf1a:V28I,S:S31del Query: T14700C ,C832T, C897A No. of seqs: 65 usher Screenshot (161)

FedeGueli commented 2 months ago

ping @corneliusroemer two interesting things of this lineage that seems to be one of the fastest Deflirt: 1) it has S:L425L silent nuc that opens up the route to acquire P or R or Q or H, interestingly all of them appear to be a disaster according to new BA.2.86 based Tyler Starr Calculator

Screenshot 2024-08-09 alle 01 02 58

2) it has C22792T, i think you remember it, it was that crazy mutation of BA.2/Ba.2.9 that messed up many trees of BA.2 for some unknown reasons.

FedeGueli commented 2 months ago

82 now a big upload from Guatemala

FedeGueli commented 2 months ago

this is now 103 please update.

@corneliusroemer it is another DeFliRT nothing new but growing.

FedeGueli commented 2 months ago

Designated KP.2.19 via https://github.com/cov-lineages/pango-designation/commit/8b27ff68dc12fe3913fca84b34a4b2e521335559