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cov-lineages / pango-designation

Repository for suggesting new lineages that should be added to the current scheme
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LF.7.1+S:A475V(33 seqs, 3 places, 45% Qatar) #2805

Open xz-keg opened 6 days ago

xz-keg commented 6 days ago

From branch 2 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/2067

There seems to be a very recent new LF.7+S:A475V branch growing in Qatar.

@FedeGueli analyse:

Qatar wasnt uploading anything in August and months before leaves us uncertainties about what is going on there. Then it suddenly starts uploads seqs. And this lineage quickly climbs up the proportion. 1-9 sept: 14%

10-19 sept: 30% 20-30 sept: 42% 1-10 october: 44%

So this branch seems growing really fast in Qatar, given nearby countries don't upload anything we don't know how prevalence it is outside Qatar, LF.7+C6310T+C22986T(S:A475V)

GISAID query: C6310T, C22986T,t3565C,-22111 No. of seqs: 24(Qatar 23 USA 1(GBW from Qatar))

First: EPI_ISL_19475572, 2024-9-16, Qatar Latest: EPI_ISL_19470004, 2024-10-4, Qatar

usher image

xz-keg commented 6 days ago

More seqs from Qatar, making it 31.

FedeGueli commented 6 days ago

More seqs from Qatar, making it 31.

I re did the maths: 1-9 sept: 14% 10-19 sept: 30% 20-30 sept: 42% 1-10 october: 44%

FedeGueli commented 4 days ago

33 Netherlands

DailyCovidCases commented 2 days ago

ping @corneliusroemer This branch is growing quickly: Screenshot (268)

xz-keg commented 4 hours ago

+1 Wales