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cov-lineages
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pangoLEARN
Store of the trained model for pangolin to access.
GNU General Public License v3.0
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versionning scheme incompatible with setuptools 66
#98
emollier
opened
1 year ago
0
lineageTree.pb update: new lineages (pango-designation release v1.13)
#97
AngieHinrichs
closed
2 years ago
0
Prerelease 2022 07 09
#96
AngieHinrichs
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.12)
#95
AngieHinrichs
closed
2 years ago
0
adding latest decision tree and rf model to pangoLEARN repo for train…
#94
aineniamh
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.11)
#93
AngieHinrichs
closed
2 years ago
0
New data version
#92
EricFournier3
closed
2 years ago
1
todo: conservatively recalculate sites and sequences when training
#91
aineniamh
opened
2 years ago
0
Problem with data update
#90
EricFournier3
closed
2 years ago
2
Prerelease v1.9
#89
AngieHinrichs
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.9)
#88
AngieHinrichs
closed
2 years ago
0
Prerelease v1.8 2022-04-22
#87
AngieHinrichs
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.8)
#86
AngieHinrichs
closed
2 years ago
0
adding latest decision tree and rf model to pangoLEARN repo for train…
#85
aineniamh
closed
2 years ago
0
Error in rule pangolearn after 04/09/2022 update
#84
egenomics
closed
2 years ago
6
Typo "2021" in latest release name?
#83
Mike-Honey
closed
2 years ago
2
adding latest decision tree and rf model to pangoLEARN repo for train…
#82
aineniamh
closed
2 years ago
0
pangoLEARN seems to detect only a third of XEs
#81
corneliusroemer
closed
2 years ago
3
5% of BA.1.1 carrying the R346K mutations are classified as BA.1
#80
wodanaz
opened
2 years ago
4
Prerelease v1.2.133 - updated lineageTree.pb
#79
AngieHinrichs
closed
2 years ago
0
lineageTree.pb update: pango-designation release v1.2.133 with updates to BA.1.17, BA.1.1.1
#78
AngieHinrichs
closed
2 years ago
0
Prerelease v1.2.133
#77
aineniamh
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.2.133)
#76
AngieHinrichs
closed
2 years ago
0
detect the recombinant lineage (pango-designation v1.2.133)
#75
alantsangmb
closed
2 years ago
2
Dependency quokka to run the training pipeline
#74
fischer-hub
closed
2 years ago
2
Prerelease v1.2.127
#73
aineniamh
closed
2 years ago
0
__init__.py has wrong version data
#72
aknijn
closed
2 years ago
3
lineageTree.pb update: new lineages (pango-designation release v1.2.127)
#71
AngieHinrichs
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.2.129)
#70
AngieHinrichs
closed
2 years ago
0
Prerelease v1.2.124
#69
rmcolq
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.2.124)
#68
AngieHinrichs
closed
2 years ago
0
True B.1 sequences from early 2021 falsely classified as BA.1.1
#67
hoelzer
closed
2 years ago
8
Prerelease v1.2.123
#66
rmcolq
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.2.123)
#65
AngieHinrichs
closed
2 years ago
0
lineageTree.pb update: fix 46.6
#64
AngieHinrichs
closed
2 years ago
0
Release 2022-01-05 produces generic lineage for Omicron
#63
quaeler
closed
2 years ago
12
lineageTree.pb update: new lineages (pango-designation release v1.2.121)
#62
AngieHinrichs
closed
2 years ago
0
Prerelease v1.2.112
#61
rmcolq
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.2.112)
#60
AngieHinrichs
closed
2 years ago
0
Prerelease v1.2.105
#59
rmcolq
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.2.105)
#58
AngieHinrichs
closed
2 years ago
0
Efficient position finding with no pandas dependency
#57
aineniamh
closed
2 years ago
0
Efficient position finding- adding a script similar to the quokka script to repo. Doesn't have pandas dependency.
#56
aineniamh
closed
2 years ago
0
lineageTree.pb update: new lineages (pango-designation release v1.2.104)
#55
AngieHinrichs
closed
2 years ago
0
Merge prerelease v1.2.101
#54
rmcolq
closed
2 years ago
0
Pangolearn Update
#53
santoshe1
closed
2 years ago
2
lineageTree.pb update: new lineages (pango-designation release v1.2.101)
#52
AngieHinrichs
closed
2 years ago
0
Merge prerelease_v1.2.97 into master.
#51
AngieHinrichs
closed
2 years ago
0
lineageTree.pb fix for AY.100
#50
AngieHinrichs
closed
2 years ago
0
lineageTree.pb fix for AY.100
#49
AngieHinrichs
closed
2 years ago
0
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