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cox-labs / CoxLab_Bug_Reporting

MaxQuant and Perseus Bug Reporting
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LFQ normalization error #20

Open Chunyan-Hou opened 1 year ago

Chunyan-Hou commented 1 year ago

Dear All,

I tried to run LFQ for 12 thermo raw files (3 conditions × 4 replicates) on MQ. The software crushed with a label free normalization error no matter the normalization step was applied or not. I also downloaded the newest version of MQ, i.e. 2.3.1.0. It ended up with the same error. I tried with other data and got the same error. It seems that there are a number of reports on this issue. I am wondering if anyone has some idea to fix it. Thank you.

Desktop (please complete the following information):

Label-free_normalization 11.error.txt

YinHaoQiang commented 1 year ago

I also tried to run LFQ for 18 thermo raw files (6 conditions × 3 replicates) on MQ.I had the same problem.I use the same parameters and the same fasta files, I rarely get a successful run, and more often I get an error at LFQ normalization.