Calls: as.matrix -> rarefy - Githubissues

cozygene / FEAST

Fast expectation maximization for microbial source tracking

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Calls: as.matrix -> rarefy #20

Open XiongGZ opened 3 years ago

XiongGZ commented 3 years ago

Hello！ I got error when using FEAST when sourcetrack human gut metagenome. Here is error report:

`

Warning messages:
1: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec, :
EOF within quoted string
2: In scan(file = file, what = what, sep = sep, quote = quote, dec = dec, :
number of items read is not a multiple of the number of columns
Error in if (sum(x[i, ]) > maxdepth) { :
missing value where TRUE/FALSE needed
Calls: as.matrix -> rarefy
Execution halted

`

I upload the test files. Can you help me solve the problem?please

XiongGZ commented 3 years ago

[Uploading R_sp_r-s138-cl_matrix.txt…]()