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cozygene / FEAST

Fast expectation maximization for microbial source tracking
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incorrect number of dimensions #44

Closed FlorenciaTL closed 1 year ago

FlorenciaTL commented 1 year ago

Hi There,

I was trying to plot the results but it keep giving me the same error:

Error in mixing_proportions[which(rownames(mixing_proportions) %in% SinkNames), : incorrect number of dimensions

This error message comes up even when I try the demo data. I'm able to run FEAST and get the output file but once I try the plotting command I get the error above.

I would appreciate any advice on this

Thanks

liashenhav commented 1 year ago

Hi,

I think this issue was solved in this thread: https://github.com/cozygene/ FEAST/issues/43

Let me know if it works.

Thanks, Liat

On Sun, Oct 23, 2022 at 12:09 PM Monica F Torrez Lamberti < @.***> wrote:

Hi There,

I was trying to plot the results but it keep giving me the same error:

Error in mixing_proportions[which(rownames(mixing_proportions) %in% SinkNames), : incorrect number of dimensions

This error message comes up even when I try the demo data. I'm able to run FEAST and get the output file but once I try the plotting command I get the error above.

I would appreciate any advice on this

Thanks

— Reply to this email directly, view it on GitHub https://github.com/cozygene/FEAST/issues/44, or unsubscribe https://github.com/notifications/unsubscribe-auth/AIQ7SATZBPEBJKNUJA7P4NLWEVPKZANCNFSM6AAAAAARMLE3MM . You are receiving this because you are subscribed to this thread.Message ID: @.***>

-- Liat Shenhav, PhD Independent Research Fellow Center for Studies in Physics and Biology The Rockefeller University 1230 York Ave, New York, NY 10065 Tel: (212) 327-8531

FlorenciaTL commented 1 year ago

Thanks Liat!

That solved the issue. Is there any reason why it would plot the results for just 4 samples?