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cozygene / glint

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Install Issue - R/RStudio #15

Closed cewim closed 12 months ago

cewim commented 12 months ago

Hello,

I am interested in using GLINT for DNA methylation analysis in R/RStudio. I've downloaded the source package and unzipped the file. However, I'm running into an issue with the installation.

install.packages("~/Downloads/glint-1.0.4/glint-1.0.4", repos = NULL, type="source")

Warning: invalid package '~Documents/Downloads/glint-1.0.4/glint-1.0.4' Error: ERROR: no packages specified Warning in install.packages: installation of package ‘ ~/Downloads/glint-1.0.4/glint-1.0.4’ had non-zero exit status

I'm running R 4.3.1 in RStudio on Windows 10, if that helps. My working directory is also set to the folder that is the source file.

Any ideas what I might be doing wrong?

Many thanks,

Courtney

E-R commented 12 months ago

glint is a command-line based python package and cannot be installed as an R package. Please see the README file for details.