Closed cpouchon closed 5 years ago
elif "RSZ" in cf:
r1path=os.path.dirname(cf)+"/"+fnmatch.filter(os.listdir(os.path.dirname(cf)), '*_1.fq.gz')[0]
r2path=os.path.dirname(cf)+"/"+fnmatch.filter(os.listdir(os.path.dirname(cf)), '*_2.fq.gz')[0]
the same issue for AXZ in genoscope not the same format
/bettik/LECA/phyloskims/data/prerelease/phyloalps/Dichondra_micrantha:1053343/PHA002955/RSZ:RSZAXPI000773-102/
RSZ plateform == BGI?