Closed monique2208 closed 9 months ago
raw data in bids should be read-only, this seems like good practice
indeed that seems like the desirable thing to do
let me check but it seems that for some reason I temporarily save things in the raw dataset and not the derivatives one
yup this is due to this:
will push a fix to make sure the raw dataset is left pristine
thanks for the bug report
@monique2208
This should be fixed but I will need to make a new release and push a new docker image so you can make use of it.
Alternatively you should be able to pull the 'unstable' image of bidspm which should correspond to the bidspm that lives on the main branch of this repo.
docker pull cpplab/bidspm:unstable
It can be useful to test that bugs have indeed been fixed.
I just need to make sure that the unstable image is indeed put on docker hub automatically, so don't try it out just yet.
@all-contributors please add @monique2208 for bug
@Remi-Gau
I've put up a pull request to add @monique2208! :tada:
Is there an existing issue for this?
Operating system
Operating system version
Windows 11
SPM 12 version
Platform
Platform version
Latest docker container
bidspm version
v3.1.0
bidspm branch / commit number
No response
Expected Behavior
I am used to setting specifying that the raw data in bids should be read-only, this seems like good practice, but when I run the stats action using bidspm this results in an error. I ran the following:
If I omit the ro flag when binding the directory, it produces the statistical result as I expect. As far as I can tell nothing gets added or changed in the raw data, it seems that some onset file is written temporarily into the raw data.
BIDS stats model
No response
Current Behavior & Error message
Anything else?
No response