Jackson Serialization Issue with Library Refresh Operation

[c-schuler]

Description

Implementers reported invalid ELM XML generation using the Library refresh operation with latest tooling (v3.4.0).

For description of issue and steps to reproduce see https://github.com/reason-healthcare/CQFToolingBug/blob/main/README.md

Additionally, an issue was reported with the shouldApplySoftwareSystemStamp parameter being ignored by the Library refresh operation.

• Replaced Jackson ELM serialization with JAXB

• Added shouldApplySoftwareSystemStamp to Library refresh parameters

• Added tests (also tested in the repro repository referenced above)

• Removed tooling-cli directory from tooling module (seemed like that was committed by mistake(?))

• Github Issue:

• [x] I've read the contribution guidelines

• [x] Code compiles without errors

• [x] Tests are created / updated

• [ ] Documentation is created / updated

By creating this PR you acknowledge that your contribution will be licensed under Apache 2.0

[codecov[bot]]

Codecov Report

Attention: Patch coverage is 0% with 8 lines in your changes are missing coverage. Please review.

Project coverage is 20.25%. Comparing base (f322c86) to head (35ec89c).

Files	Patch %	Lines
...ssor/argument/RefreshLibraryArgumentProcessor.java	0.00%	8 Missing :warning:

Additional details and impacted files

```diff @@ Coverage Diff @@ ## master #527 +/- ## ========================================= Coverage 20.25% 20.25% - Complexity 1519 1521 +2 ========================================= Files 296 296 Lines 25191 25199 +8 Branches 3978 3979 +1 ========================================= + Hits 5102 5104 +2 - Misses 19240 19248 +8 + Partials 849 847 -2 ```

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.